Homologs in group_1409

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_08700 FBDBKF_08700 95.3 Morganella morganii S1 nlpI lipoprotein NlpI
EHELCC_12825 EHELCC_12825 95.3 Morganella morganii S2 nlpI lipoprotein NlpI
NLDBIP_13165 NLDBIP_13165 95.3 Morganella morganii S4 nlpI lipoprotein NlpI
LHKJJB_13390 LHKJJB_13390 95.3 Morganella morganii S3 nlpI lipoprotein NlpI
HKOGLL_11640 HKOGLL_11640 95.3 Morganella morganii S5 nlpI lipoprotein NlpI
PMI_RS17050 PMI_RS17050 78.6 Proteus mirabilis HI4320 nlpI lipoprotein NlpI

Distribution of the homologs in the orthogroup group_1409

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1409

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q1CM50 1.81e-165 464 75 1 295 3 nlpI Lipoprotein NlpI Yersinia pestis bv. Antiqua (strain Nepal516)
Q7CKI5 1.81e-165 464 75 1 295 3 nlpI Lipoprotein NlpI Yersinia pestis
Q1C3L9 1.81e-165 464 75 1 295 3 nlpI Lipoprotein NlpI Yersinia pestis bv. Antiqua (strain Antiqua)
Q31W42 5.08e-156 440 72 1 295 3 nlpI Lipoprotein NlpI Shigella boydii serotype 4 (strain Sb227)
B7NDE9 7.61e-156 439 72 1 295 3 nlpI Lipoprotein NlpI Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
P0AFB4 2.25e-155 438 72 1 295 3 nlpI Lipoprotein NlpI Shigella flexneri
P0AFB1 2.25e-155 438 72 1 295 1 nlpI Lipoprotein NlpI Escherichia coli (strain K12)
P0AFB2 2.25e-155 438 72 1 295 3 nlpI Lipoprotein NlpI Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TCU6 2.25e-155 438 72 1 295 3 nlpI Lipoprotein NlpI Escherichia coli O6:K15:H31 (strain 536 / UPEC)
D5D1H3 2.25e-155 438 72 1 295 3 nlpI Lipoprotein NlpI Escherichia coli O18:K1:H7 (strain IHE3034 / ExPEC)
A1AG68 2.25e-155 438 72 1 295 3 nlpI Lipoprotein NlpI Escherichia coli O1:K1 / APEC
B1XGX5 2.25e-155 438 72 1 295 3 nlpI Lipoprotein NlpI Escherichia coli (strain K12 / DH10B)
C4ZSQ4 2.25e-155 438 72 1 295 2 nlpI Lipoprotein NlpI Escherichia coli (strain K12 / MC4100 / BW2952)
C6EH62 2.25e-155 438 72 1 295 3 nlpI Lipoprotein NlpI Escherichia coli (strain B / BL21-DE3)
E4P9W4 2.25e-155 438 72 1 295 3 nlpI Lipoprotein NlpI Escherichia coli O83:H1 (strain NRG 857C / AIEC)
P0AFB3 2.25e-155 438 72 1 295 2 nlpI Lipoprotein NlpI Escherichia coli O157:H7
Q7CPQ1 4.02e-155 437 72 1 295 3 nlpI Lipoprotein NlpI Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q8XG77 4.02e-155 437 72 1 295 3 nlpI Lipoprotein NlpI Salmonella typhi
Q57JI4 4.02e-155 437 72 1 295 3 nlpI Lipoprotein NlpI Salmonella choleraesuis (strain SC-B67)
P44585 4.98e-67 214 40 1 285 1 nlpI Lipoprotein NlpI homolog Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q96301 1.41e-05 50 35 0 82 1 SPY Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY Arabidopsis thaliana
Q96301 0.000792 44 28 0 101 1 SPY Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY Arabidopsis thaliana
A0A1L8FDW4 2.62e-05 49 37 0 78 1 pex5.S Peroxisomal targeting signal 1 receptor Xenopus laevis
Q8RVB2 2.67e-05 49 34 0 82 2 SPY Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY Solanum lycopersicum
Q8RVB2 0.000609 45 28 0 83 2 SPY Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY Solanum lycopersicum
Q8LP10 3.12e-05 48 30 2 126 2 SPY Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY Eustoma exaltatum subsp. russellianum
O82039 3.13e-05 48 34 0 82 2 SPY Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY Petunia hybrida
Q86TZ1 0.000101 47 28 4 141 1 TTC6 Tetratricopeptide repeat protein 6 Homo sapiens
Q1RMV0 0.000154 46 37 0 78 2 PEX5 Peroxisomal targeting signal 1 receptor Bos taurus
Q5ZMQ9 0.00035 45 34 0 78 2 PEX5 Peroxisomal targeting signal 1 receptor Gallus gallus
Q6BM14 0.000406 45 36 0 69 3 PEX5 Peroxisomal targeting signal receptor Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968)
O74711 0.000441 45 36 0 69 3 PEX5 Peroxisomal targeting signal receptor Candida albicans (strain SC5314 / ATCC MYA-2876)
O70525 0.000447 45 35 0 78 2 PEX5 Peroxisomal targeting signal 1 receptor Cavia porcellus
P50542 0.000563 45 35 0 78 1 PEX5 Peroxisomal targeting signal 1 receptor Homo sapiens
Q2M2R8 0.000584 45 35 0 78 1 Pex5 Peroxisomal targeting signal 1 receptor Rattus norvegicus
O09012 0.000589 45 35 0 78 1 Pex5 Peroxisomal targeting signal 1 receptor Mus musculus
Q920N5 0.000616 45 35 0 78 1 PEX5 Peroxisomal targeting signal 1 receptor Cricetulus griseus
O82422 0.000894 44 30 0 82 2 SPY Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY Hordeum vulgare

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS09920
Feature type CDS
Gene nlpI
Product lipoprotein NlpI
Location 88668 - 89555 (strand: 1)
Length 888 (nucleotides) / 295 (amino acids)

Contig

Accession term accessions NZ_VXKB01000002 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1409
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF13181 Tetratricopeptide repeat
PF13432 Tetratricopeptide repeat

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4785 Cell wall/membrane/envelope biogenesis (M) M Lipoprotein NlpI, contains TPR repeats

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K05803 lipoprotein NlpI - -

Protein Sequence

MNFFLRWWSIAAILFIAGCSGGKNWHLREPLAVPLQPSLQQEVILARMEQILASRSLTEDEYAQLLYQRGVLYDSLGLQALARNDFTVALSMRPDIPEIFNYLGIYFTQAGNFDAAYEAYDSVLELDPTYNYARMNRGIALYYGGRYPVARDDLQAFYQDDPNDPFRSLWLYLVDKEIDPKKALADLRQRYEQAKGGQWGWNIAEFYLGDISEKTLLARVAEFSTDNTSLAEHLSETYFYLGKYYLSLGDTDSAETLFKLTVANNAHSFVEHRYALLELALLGDEEQDLTDSDPQ

Flanking regions ( +/- flanking 50bp)

TGTCAGTCAGAGGATTTTCCTTTAAAAGGATCTGACTTCGGGAGTAGGAAATGAATTTTTTTCTGCGTTGGTGGAGCATTGCGGCTATACTTTTTATCGCAGGATGTAGCGGCGGTAAAAATTGGCACCTTCGGGAGCCTCTTGCGGTACCCTTGCAACCATCTTTACAGCAGGAAGTGATCCTCGCCCGTATGGAGCAAATCCTGGCAAGCCGGTCATTGACTGAGGACGAATACGCCCAGCTGCTTTATCAGCGTGGTGTGTTGTATGACAGCCTTGGATTGCAGGCATTGGCACGTAATGATTTTACCGTTGCGTTATCAATGCGTCCGGATATTCCGGAGATATTTAATTACCTGGGCATTTATTTTACGCAGGCGGGCAACTTTGATGCGGCCTATGAAGCGTATGATTCTGTATTAGAGCTTGATCCAACTTATAACTACGCGCGTATGAATCGCGGTATCGCTCTGTATTACGGGGGCCGGTATCCGGTAGCGCGGGATGATCTGCAGGCGTTTTATCAAGATGATCCAAACGATCCGTTTCGCTCGCTGTGGCTCTATCTGGTCGACAAAGAGATAGATCCGAAGAAAGCACTGGCTGATTTACGCCAGCGCTATGAACAGGCGAAAGGCGGACAATGGGGCTGGAATATTGCTGAATTCTATCTGGGTGACATCAGTGAAAAAACACTGCTGGCACGCGTCGCAGAATTCTCAACGGATAACACTTCGCTCGCTGAACATCTCAGTGAAACCTACTTCTATTTAGGTAAATATTACCTAAGTCTGGGGGATACGGATAGCGCTGAAACGCTATTCAAGCTGACGGTTGCCAACAACGCACACAGTTTTGTTGAGCACCGCTACGCATTGTTGGAATTAGCTCTGTTAGGTGATGAAGAACAGGACCTGACGGATTCAGATCCACAATAGCTACGAACAAACTTCAACCCATTTTTTTTCACCATCGCTGATGTGATGGG