Homologs in group_1354

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_08390 FBDBKF_08390 88.9 Morganella morganii S1 pldB lysophospholipase L2
EHELCC_13135 EHELCC_13135 88.9 Morganella morganii S2 pldB lysophospholipase L2
NLDBIP_13475 NLDBIP_13475 88.9 Morganella morganii S4 pldB lysophospholipase L2
LHKJJB_13080 LHKJJB_13080 88.9 Morganella morganii S3 pldB lysophospholipase L2
HKOGLL_11950 HKOGLL_11950 88.9 Morganella morganii S5 pldB lysophospholipase L2
PMI_RS16645 PMI_RS16645 60.5 Proteus mirabilis HI4320 pldB lysophospholipase L2

Distribution of the homologs in the orthogroup group_1354

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1354

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P07000 2.72e-122 357 54 1 323 1 pldB Lysophospholipase L2 Escherichia coli (strain K12)
P59588 2.72e-122 357 54 1 323 3 pldB Lysophospholipase L2 Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P44800 1.77e-49 170 31 4 319 3 pldB Probable lysophospholipase L2 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
A0QNZ7 2.96e-16 80 24 7 305 1 MSMEG_0220 Monoacylglycerol lipase Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155)
O07427 1.11e-14 76 24 9 310 1 Rv0183 Monoacylglycerol lipase Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
O34705 1.11e-06 52 22 9 268 1 ytpA Phospholipase YtpA Bacillus subtilis (strain 168)
A0A7H0DN16 2.44e-05 48 21 5 281 3 OPG043 Monoglyceride lipase homolog Monkeypox virus

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS09590
Feature type CDS
Gene pldB
Product lysophospholipase L2
Location 19158 - 20159 (strand: 1)
Length 1002 (nucleotides) / 333 (amino acids)

Contig

Accession term accessions NZ_VXKB01000002 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1354
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF12146 Serine aminopeptidase, S33

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2267 Lipid transport and metabolism (I) I Lysophospholipase, alpha-beta hydrolase superfamily

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K01048 lysophospholipase [EC:3.1.1.5] Glycerophospholipid metabolism -

Protein Sequence

MLSPDSLKAGWLEREAQYSAFVNGPLLDFWNQRDERTFQGADDITIRYVQFTRPAHTKVLIISSGRGESYVKYPEVLYDFFHQGFDVFIMDHRGQGLSGRMLDEPQKGHVERFTDYIDDFSAFTNTALATKAYTRRYALAHSMGSAILSGYLLREPDTFRAAVLCAPMFGIKLPMPMWLANMIVNRADNRPSERNEYAVSTGRWQPLPFLINVLTHSYPRYRRYLRCYADYPALRLGGPTYHWLRESIDVGQQIIARAGEITTPLMVLMASEDKVVDNRELLAFCENRRKARTGKEEEQLPLTFEGAYHEILFEEDALRAVALNAICQFFERH

Flanking regions ( +/- flanking 50bp)

GCCCTGATCCGGGAGCACCTTACCGGAACCGATGACTAAAGGAGTACTCTATGCTGTCACCGGATAGCCTGAAAGCAGGCTGGCTGGAACGCGAGGCACAATACTCAGCCTTTGTGAACGGCCCGTTACTCGACTTCTGGAACCAGCGGGATGAGCGTACTTTTCAGGGCGCGGACGATATCACTATCCGCTATGTGCAGTTTACCCGCCCCGCACACACTAAAGTTCTGATTATCAGCTCCGGCCGGGGCGAAAGCTACGTTAAATATCCGGAAGTATTATACGATTTTTTTCATCAGGGCTTTGATGTCTTCATTATGGATCATCGCGGGCAGGGACTGTCCGGCCGGATGCTGGATGAACCTCAGAAAGGTCATGTAGAGCGTTTCACCGACTATATTGATGATTTCTCAGCCTTTACCAATACCGCTCTGGCAACAAAAGCCTATACCCGCCGTTATGCACTGGCGCACTCGATGGGCAGTGCAATATTGAGCGGATATCTGTTACGCGAGCCGGATACATTCCGTGCCGCCGTATTATGTGCCCCGATGTTCGGCATTAAATTACCGATGCCGATGTGGCTGGCAAATATGATTGTGAACCGGGCCGACAACCGGCCTTCGGAGCGCAATGAGTATGCGGTATCAACCGGGAGGTGGCAGCCGTTGCCGTTTTTAATCAACGTGCTGACTCATAGTTACCCGCGATACCGGCGTTACCTGCGTTGTTATGCTGACTATCCGGCTTTGCGTCTCGGCGGACCCACGTATCACTGGCTACGTGAGAGCATTGATGTCGGACAGCAGATAATTGCGCGGGCGGGAGAGATTACCACTCCGCTGATGGTGCTGATGGCATCAGAAGATAAAGTGGTCGACAATCGGGAGCTGTTGGCTTTCTGCGAAAATCGCCGGAAAGCCCGGACAGGAAAAGAAGAAGAACAATTGCCCCTGACTTTTGAGGGCGCATATCACGAAATCCTGTTTGAAGAGGATGCATTGCGTGCAGTTGCACTCAATGCAATTTGCCAATTTTTTGAGCGACACTAACCCAATCCAGGAAATCTTGAATATGTATCATGTAGTTGCTTCGGATTTAG