Homologs in group_3729

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2 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
F4V73_RS08445 F4V73_RS08445 38.8 Morganella psychrotolerans - fimbrial-like protein
F4V73_RS13310 F4V73_RS13310 29.1 Morganella psychrotolerans - fimbrial protein

Distribution of the homologs in the orthogroup group_3729

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3729

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS08440
Feature type CDS
Gene -
Product fimbrial protein
Location 1742665 - 1743243 (strand: 1)
Length 579 (nucleotides) / 192 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3729
Orthogroup size 3
N. genomes 1

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Genomic region

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3539 Cell motility (N) N Pilin (type 1 fimbrial protein)

Protein Sequence

MHLIRKLFFVFTLPGALVFALLPSAQAATSATTAFTATIVGGACNISAPPTVSVNSGAVIASEDIAAGTGPEASFNLTLSGCKGYGLVPSITLEGDVSNTSGKPLFLSNTSTTKGYGILLTTKGNTNFKTSDNLAADMKITAETKTWATTMASSLNGTIPVIASVSCGDCAADADIQGGELKASVAFKFEYN

Flanking regions ( +/- flanking 50bp)

CTCACGTTTAATCTGATATTTCAGTAACCGATTGATAGCGGAATACCATTATGCATTTGATTAGAAAGTTATTTTTTGTTTTTACCCTGCCGGGCGCACTGGTTTTCGCTTTACTTCCGAGCGCACAGGCAGCCACTTCTGCGACAACGGCCTTTACCGCCACCATTGTCGGCGGAGCCTGTAATATCAGCGCCCCACCGACTGTGTCCGTTAACAGCGGTGCTGTCATTGCATCAGAAGATATCGCCGCCGGTACCGGCCCTGAAGCCTCTTTCAATCTGACCCTGTCAGGCTGCAAAGGATATGGTCTGGTACCGTCAATCACACTGGAAGGTGATGTCAGCAATACATCAGGAAAGCCGTTATTTCTCAGTAATACCAGTACCACCAAAGGTTACGGTATTTTGCTGACCACAAAGGGCAATACCAATTTCAAGACGAGTGACAACCTTGCTGCTGATATGAAAATTACCGCAGAAACTAAAACATGGGCCACCACAATGGCGTCATCACTGAACGGGACGATCCCTGTTATAGCCTCAGTCAGTTGCGGCGACTGTGCTGCTGATGCCGATATTCAGGGTGGTGAACTGAAAGCCTCTGTTGCCTTTAAATTTGAATATAACTGACCACGGGCTACATACCCATGATGATGACACCTGAATTACGTATTTCCGCC