Homologs in group_4089

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4089

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4089

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS08405
Feature type CDS
Gene -
Product HrpE/YscL family type III secretion apparatus protein
Location 1737751 - 1738374 (strand: 1)
Length 624 (nucleotides) / 207 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_4089
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF06188 HrpE/YscL/FliH and V-type ATPase subunit E

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1317 Cell motility (N)
Intracellular trafficking, secretion, and vesicular transport (U)		 NU Flagellar biosynthesis/type III secretory pathway protein FliH

Protein Sequence

MPDDTALPDSTSLPLSRLTTDSYTLTTAPCIIRAADYRVLLNSQTLKADTEQLRLKMQSELNDEMAARRKNAEEELACARTQILLETRQHCREVITQLDAEITALICHTIHILLEDAPVQTRLRAALRGGLSRTNPQFSLTLTVHPDQADFLHQWLTAEETIPLPEDIFVDTDNSLLSGDCLIRQGRQVIHATLDNQLTVLKLILPA

Flanking regions ( +/- flanking 50bp)

TTCCCGCCGGTTCCTTTTCCTGCCGAACTGACACCATTACTGAATACATTATGCCTGACGATACTGCACTCCCTGACTCAACCAGCCTGCCACTCAGCCGTCTGACGACAGACTCTTATACTCTGACAACCGCGCCTTGTATTATCCGGGCAGCGGATTACAGGGTATTACTCAATAGTCAGACCCTGAAAGCGGATACAGAACAGTTGCGTCTGAAAATGCAGAGCGAACTCAATGATGAAATGGCTGCCCGCCGAAAGAATGCAGAAGAAGAACTGGCCTGCGCGCGGACACAAATCCTGCTGGAAACCCGGCAACATTGCCGGGAGGTTATCACACAGCTCGATGCCGAAATAACGGCACTTATCTGCCATACGATACATATCCTGCTGGAGGATGCACCGGTACAAACCCGTCTGCGCGCTGCGCTGCGCGGGGGGTTAAGCCGGACAAATCCGCAGTTTTCTCTGACGCTGACAGTCCATCCGGATCAGGCGGATTTTCTGCATCAATGGCTGACCGCAGAAGAGACGATTCCGTTGCCGGAAGATATTTTTGTTGATACAGACAACTCACTCCTGTCGGGAGACTGTCTTATCCGCCAGGGCAGACAGGTTATCCATGCCACCCTGGATAACCAACTGACGGTACTGAAACTCATTTTGCCGGCTTAATCCGGCAAAACAGCAAATGACCGGACAGGGAACCCTCCGGCATTATCTGG