COG1317


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1317, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 8 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Flagellar biosynthesis/type III secretory pathway protein FliH
Function(s) descr. Cell motility (N)
Intracellular trafficking, secretion, and vesicular transport (U)

Occurence in the database

COG1317 is associated with 8 different proteins (see tab "Protein list" and "Profile")
The 8 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_453 FBDBKF_00600 99833 100570 1 fliH flagellar assembly protein FliH Morganella morganii S1
1 group_453 EHELCC_00945 208298 209035 -1 fliH flagellar assembly protein FliH Morganella morganii S2
2 group_453 NLDBIP_02515 471101 471838 1 fliH flagellar assembly protein FliH Morganella morganii S4
3 group_453 LHKJJB_04030 78342 79079 1 fliH flagellar assembly protein FliH Morganella morganii S3
4 group_453 HKOGLL_03015 208503 209240 -1 fliH flagellar assembly protein FliH Morganella morganii S5
5 group_453 F4V73_RS06610 1376756 1377487 1 fliH flagellar assembly protein FliH Morganella psychrotolerans
6 group_4089 F4V73_RS08405 1737751 1738374 1 HrpE/YscL family type III secretion apparatus protein Morganella psychrotolerans
7 group_453 PMI_RS07970 1745961 1746683 1 fliH flagellar assembly protein FliH Proteus mirabilis HI4320