Homologs in group_4084

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4084

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4084

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P40296 6.37e-08 56 23 7 301 1 yscQ Yop proteins translocation protein Q Yersinia pseudotuberculosis serotype I (strain IP32953)
P42713 6.37e-08 56 23 7 301 3 yscQ Yop proteins translocation protein Q Yersinia pestis

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS08330
Feature type CDS
Gene -
Product FliM/FliN family flagellar motor switch protein
Location 1726393 - 1727298 (strand: 1)
Length 906 (nucleotides) / 301 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_4084
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF01052 Type III flagellar switch regulator (C-ring) FliN C-term

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1886 Cell motility (N)
Intracellular trafficking, secretion, and vesicular transport (U)		 NU Flagellar motor switch/type III secretory pathway protein FliN

Protein Sequence

MTDKLSCPVIILSEQDIAAIYLREHYQTHYSAGTKNAEVCYQTQTTELALTVSRQGHSGFIYCSYADLAILLEDTLSGTDIRLLPDEILIALVSAWLNAFSAGLSIQKIKKEEQEITGISVIYSGSIFIFSDISLIHSHLKSIPDSIAQIPIEIRLCSPAFYLAYSEILTLHADDLIISPLADNNSAVSVYYRHYSVAAGIQLSNKVTIRKMTTLSRHHTSLSPLKGRLYFELAETEISLAELAGMKTDSLIELTDKTTNYIRIFCDETHIANGILVSFQQRLAVQIKEFTGLQAAPGTGS

Flanking regions ( +/- flanking 50bp)

CGCTGACCGGTAATATGTCCGGATCACCCGCCGCCATAAGGCGCAGATAAATGACTGACAAGCTGAGCTGCCCGGTCATCATTCTCAGTGAACAGGATATTGCTGCCATCTACCTGCGGGAACATTATCAGACTCACTATAGCGCCGGGACAAAGAACGCGGAAGTTTGTTATCAGACACAAACAACCGAATTGGCGCTGACTGTCAGCAGGCAGGGACATAGCGGGTTTATTTATTGTTCTTATGCAGATCTTGCTATTTTACTGGAGGATACATTATCAGGTACAGATATCCGCCTGCTGCCGGATGAAATACTGATTGCGTTAGTATCCGCATGGCTAAATGCATTCTCAGCCGGGCTATCCATCCAAAAGATAAAAAAAGAAGAACAAGAAATCACCGGTATCTCTGTTATTTACTCCGGTTCTATTTTTATTTTCTCTGATATTTCACTGATTCATTCACACCTTAAATCTATTCCTGACTCTATAGCGCAAATACCCATTGAAATTCGCCTTTGCTCTCCCGCTTTTTATCTTGCCTACAGTGAGATACTGACATTACACGCTGATGACCTGATAATCAGCCCGCTGGCAGATAATAACAGTGCGGTGTCAGTATATTACCGGCACTACTCTGTTGCGGCAGGTATACAGCTTTCAAATAAGGTGACTATCCGAAAAATGACAACGCTCTCCCGGCACCATACATCATTATCACCGCTGAAAGGCAGGCTTTATTTTGAACTGGCTGAAACGGAGATAAGCCTGGCTGAACTCGCCGGAATGAAAACGGATTCGTTAATTGAATTAACTGATAAAACAACAAACTACATCCGTATTTTTTGTGATGAAACACATATTGCCAATGGCATACTTGTCTCTTTCCAACAACGCCTGGCGGTCCAGATAAAAGAATTTACCGGCTTACAGGCCGCTCCCGGCACCGGCTCATGAATTTATCTGATCCACTATTTTTGATTGCTCTTCTGGCATTTCTTTCTTTT