Homologs in group_2861

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_10960 FBDBKF_10960 75.5 Morganella morganii S1 - Polymer-forming cytoskeletal protein
EHELCC_05265 EHELCC_05265 75.5 Morganella morganii S2 - Polymer-forming cytoskeletal protein
NLDBIP_05585 NLDBIP_05585 75.5 Morganella morganii S4 - Polymer-forming cytoskeletal protein
LHKJJB_02465 LHKJJB_02465 75.5 Morganella morganii S3 - Polymer-forming cytoskeletal protein
HKOGLL_15845 HKOGLL_15845 75.5 Morganella morganii S5 - Polymer-forming cytoskeletal protein

Distribution of the homologs in the orthogroup group_2861

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2861

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q9JMT6 8.26e-07 51 37 0 96 3 yuaD Uncharacterized membrane protein YuaD Escherichia coli (strain K12)
Q1D3H2 0.000659 43 29 5 127 1 bacP Bactofilin BacP Myxococcus xanthus (strain DK1622)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS08265
Feature type CDS
Gene -
Product polymer-forming cytoskeletal protein
Location 1715219 - 1715944 (strand: -1)
Length 726 (nucleotides) / 241 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2861
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF04519 Polymer-forming cytoskeletal

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1664 Cytoskeleton (Z) Z Cytoskeletal protein CcmA, bactofilin family

Protein Sequence

MFGKKKQAETQADEQAAVAVPVQKTKEAEEKKAAEINAQANEISQLLSVRGDEKQPRPLASLESRQPTVISKETRLTGDIDLSGNLQIWGKIKGQIKARSGTVSIMQSGVVDGDIIAETLLIDGVLSGTCSVEQLEILEHGELNGICRASNFSIRKGGIFIGQSEPYVAPAGSKTTAAPQPSRPEPLKVQAVSEPVLDLKQEQKQEPQQTKAPEPQKSSSQQPSAAKGKEPQKVPSVFKNV

Flanking regions ( +/- flanking 50bp)

CAGTTATCTATTTCATTATGGTTATCTCGAAGAGGAAAAGGAAAAAATCCATGTTCGGAAAGAAAAAACAAGCTGAAACTCAGGCGGATGAGCAAGCCGCCGTAGCCGTCCCCGTACAGAAAACCAAAGAAGCTGAAGAGAAAAAAGCGGCAGAGATTAATGCCCAGGCAAATGAAATTTCTCAGTTACTGTCAGTCCGTGGTGATGAAAAACAGCCGCGTCCGCTGGCTTCCCTTGAATCCCGCCAGCCAACCGTTATCAGCAAAGAAACCCGCCTGACCGGGGATATCGATCTGAGCGGCAATCTGCAAATCTGGGGTAAAATTAAAGGTCAGATTAAAGCCCGTTCCGGAACCGTCAGTATTATGCAGTCCGGTGTGGTGGATGGCGATATCATTGCAGAAACACTGCTGATTGACGGCGTACTGAGCGGCACCTGTAGTGTGGAGCAACTGGAGATCCTGGAGCACGGCGAGCTGAACGGTATCTGCCGCGCATCTAATTTCTCTATCCGCAAAGGCGGGATTTTTATCGGTCAGTCCGAACCCTATGTTGCCCCTGCGGGAAGTAAAACAACGGCAGCACCACAGCCATCCCGTCCTGAGCCACTTAAAGTGCAGGCGGTATCTGAACCGGTACTGGATCTGAAACAGGAACAAAAGCAGGAACCGCAGCAGACAAAAGCACCTGAGCCGCAAAAATCATCATCTCAGCAGCCCTCTGCCGCTAAAGGCAAAGAGCCGCAGAAGGTGCCGTCTGTCTTTAAAAACGTGTGATTACGTCAATTGTGCATTAATTGACTATACTTGGTGTCATTCAGGATGCA