Homologs in group_1663

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_11530 FBDBKF_11530 80.7 Morganella morganii S1 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
EHELCC_17450 EHELCC_17450 80.7 Morganella morganii S2 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
NLDBIP_18660 NLDBIP_18660 80.7 Morganella morganii S4 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
LHKJJB_17890 LHKJJB_17890 80.7 Morganella morganii S3 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
HKOGLL_18760 HKOGLL_18760 80.7 Morganella morganii S5 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
F4V73_RS11545 F4V73_RS11545 25.8 Morganella psychrotolerans - TetR/AcrR family transcriptional regulator

Distribution of the homologs in the orthogroup group_1663

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1663

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P75952 1.22e-29 112 30 1 190 1 comR HTH-type transcriptional repressor ComR Escherichia coli (strain K12)
Q7WY76 5.74e-17 78 27 3 196 4 yezE Uncharacterized HTH-type transcriptional regulator YezE Bacillus subtilis (strain 168)
P39334 3.63e-16 76 26 3 189 1 bdcR HTH-type transcriptional repressor BdcR Escherichia coli (strain K12)
P32398 1.79e-05 47 30 6 163 4 yhgD Uncharacterized HTH-type transcriptional regulator YhgD Bacillus subtilis (strain 168)
Q6NH62 8.69e-05 45 22 3 159 3 acnR HTH-type transcriptional repressor AcnR Corynebacterium diphtheriae (strain ATCC 700971 / NCTC 13129 / Biotype gravis)
Q8NQ97 0.000308 43 24 3 178 1 acnR HTH-type transcriptional repressor AcnR Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS08130
Feature type CDS
Gene -
Product TetR/AcrR family transcriptional regulator
Location 1687673 - 1688281 (strand: 1)
Length 609 (nucleotides) / 202 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1663
Orthogroup size 7
N. genomes 6

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Genomic region

Domains

PF00440 Bacterial regulatory proteins, tetR family
PF16925 Tetracyclin repressor-like, C-terminal domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1309 Transcription (K) K DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K22041 TetR/AcrR family transcriptional regulator, copper-responsive repressor - -

Protein Sequence

MAGRPREFDREEALRKAKQVFWQRGYEGTSISDLVAVLGIASARIYAAFGSKENLFREAVALYLSEEGAFADAAMQEPDTRQAIKQLLGRAVEIYTRENQPHGCMVVLSLTNYTSDNEALMTWLADSRRERTAGIIQRIEQGVQSGDVPENTDIQALGDYIATLLHGISIQARDGVSRTRLLAMTDIAMRTFDVMTASPGTH

Flanking regions ( +/- flanking 50bp)

ACAAAGAACTGATAGTATTTGTCTGACACTACTCAGGCGGAGAATATGACATGGCAGGCAGACCAAGAGAATTTGATCGTGAAGAGGCATTACGCAAAGCAAAACAGGTGTTCTGGCAGCGCGGCTATGAAGGTACATCCATATCTGATCTGGTTGCTGTACTGGGAATTGCCTCTGCACGGATTTATGCCGCATTCGGCTCAAAAGAGAACCTGTTCCGTGAGGCGGTTGCCCTTTATCTGTCTGAGGAAGGCGCCTTTGCTGATGCCGCAATGCAGGAGCCGGATACCCGTCAGGCTATAAAGCAGCTTCTTGGCAGGGCAGTTGAAATCTATACCCGTGAGAACCAGCCCCACGGCTGCATGGTGGTGTTGTCACTGACCAATTACACCAGTGACAATGAAGCGCTCATGACCTGGCTTGCTGACAGCCGCCGGGAACGGACAGCCGGCATCATACAGCGTATTGAGCAAGGTGTTCAGTCTGGTGATGTGCCGGAAAACACGGATATACAGGCTCTCGGCGATTATATCGCAACACTGCTGCACGGGATCTCAATCCAGGCGCGTGATGGTGTCAGCCGGACACGCTTGCTGGCAATGACAGATATCGCTATGCGCACGTTTGATGTAATGACTGCCTCCCCGGGCACACATTAAATCTTTTTTATTTTCAGGAGGCCCGGATGTCATCTTCAGTTTCTTTTGCC