Homologs in group_1664

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_11555 FBDBKF_11555 67.6 Morganella morganii S1 catA2 type A-2 chloramphenicol O-acetyltransferase CatII
EHELCC_17475 EHELCC_17475 67.6 Morganella morganii S2 catA2 type A-2 chloramphenicol O-acetyltransferase CatII
NLDBIP_18685 NLDBIP_18685 67.6 Morganella morganii S4 catA2 type A-2 chloramphenicol O-acetyltransferase CatII
LHKJJB_17915 LHKJJB_17915 67.6 Morganella morganii S3 catA2 type A-2 chloramphenicol O-acetyltransferase CatII
HKOGLL_18735 HKOGLL_18735 67.6 Morganella morganii S5 catA2 type A-2 chloramphenicol O-acetyltransferase CatII
PMI_RS03580 PMI_RS03580 46.7 Proteus mirabilis HI4320 catA type A chloramphenicol O-acetyltransferase

Distribution of the homologs in the orthogroup group_1664

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_1664

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P22615 1.78e-116 333 69 0 213 1 cmlA Chloramphenicol acetyltransferase 2 Escherichia coli
P22616 1.52e-114 328 69 0 213 3 cat-IIH Chloramphenicol acetyltransferase 2 Haemophilus influenzae
P00484 3.28e-107 310 65 0 213 1 cat3 Chloramphenicol acetyltransferase 3 Escherichia coli
P07641 1.73e-73 224 46 1 208 3 cat Chloramphenicol acetyltransferase Proteus mirabilis
P62580 3.92e-72 221 45 1 208 3 cat Chloramphenicol acetyltransferase Salmonella typhi
P62577 3.92e-72 221 45 1 208 1 cat Chloramphenicol acetyltransferase Escherichia coli
P62579 3.92e-72 221 45 1 208 3 cat Chloramphenicol acetyltransferase Acinetobacter baumannii
P62578 3.92e-72 221 45 1 208 3 cat Chloramphenicol acetyltransferase Acinetobacter calcoaceticus subsp. anitratus
P58777 9.29e-72 220 45 1 208 1 cat Chloramphenicol acetyltransferase Klebsiella sp.
P26826 1.41e-65 204 45 2 206 3 catP Chloramphenicol acetyltransferase Clostridium perfringens
P26825 7.74e-62 195 42 1 211 3 catQ Chloramphenicol acetyltransferase Clostridium perfringens
Q02736 1.31e-61 194 40 1 206 3 catB Chloramphenicol acetyltransferase Clostridium butyricum
P20074 1.76e-60 191 42 1 202 3 cat Chloramphenicol acetyltransferase Streptomyces acrimycini
P22782 1.89e-60 191 41 2 206 3 None Chloramphenicol acetyltransferase Campylobacter coli
P11504 2.33e-59 188 44 2 206 3 catD Chloramphenicol acetyltransferase Clostridioides difficile
P06135 2.37e-59 188 39 2 212 2 cat Chloramphenicol acetyltransferase Staphylococcus aureus
P36882 2.73e-59 188 40 2 212 1 cat Chloramphenicol acetyltransferase Staphylococcus aureus
P25309 4.45e-59 187 39 2 212 3 cat Chloramphenicol acetyltransferase Staphylococcus intermedius
P36883 5.65e-59 187 40 2 206 3 None Chloramphenicol acetyltransferase Staphylococcus aureus
P00486 7.51e-59 187 39 2 206 3 cat Chloramphenicol acetyltransferase Staphylococcus aureus
Q03058 8.14e-58 184 38 2 206 3 cat Chloramphenicol acetyltransferase Streptococcus agalactiae
P00487 1.15e-56 182 40 1 203 2 cat86 Chloramphenicol acetyltransferase Bacillus pumilus
P49417 1.84e-54 176 40 2 206 3 cat Chloramphenicol acetyltransferase Vibrio anguillarum
P00485 2.66e-51 168 39 2 210 2 cat Chloramphenicol acetyltransferase Staphylococcus aureus

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS08120
Feature type CDS
Gene catA
Product type A chloramphenicol O-acetyltransferase
Location 1685512 - 1686153 (strand: -1)
Length 642 (nucleotides) / 213 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1664
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF00302 Chloramphenicol acetyltransferase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4845 Defense mechanisms (V) V Chloramphenicol O-acetyltransferase

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K19271 chloramphenicol O-acetyltransferase type A [EC:2.3.1.28] - -

AMR gene Annotation(s)

Gene Description Scope Type Class Subclass HMM
catA type A-4 chloramphenicol O-acetyltransferase || type A chloramphenicol O-acetyltransferase core AMR PHENICOL CHLORAMPHENICOL NF000491 

Protein Sequence

MNYTKVDLNTWDRKEHFEFYRHRVRCGFSLTTKLDITELRASLTETAYQFYPVMIYLITRVVNQLPAFRLAIKENDLICWESVDPVFTVFHKKTETFSTLWSRYSEDITCFMSDYTVMMAEYQDNTRMFPQGNLPENHLNISSLPWVEFDGFNLNIADFTDYFSPIFTMAKFYQEGDRILLPLSVQVHHAACDGFHVAKFINKLQCACDNVMK

Flanking regions ( +/- flanking 50bp)

CAACGAACCTGCAGTTTGAATGAATAAGGGGATAATCAGAAGGAAATAACATGAACTACACCAAGGTAGATCTCAATACATGGGATCGAAAAGAGCATTTTGAATTTTACCGCCACCGTGTCCGGTGTGGATTTAGTCTGACAACAAAACTGGATATTACCGAATTACGGGCATCGCTGACTGAAACAGCGTATCAATTTTATCCGGTGATGATTTATCTGATAACCCGGGTGGTTAATCAGCTGCCGGCATTTCGTCTCGCGATAAAAGAGAATGACTTGATTTGCTGGGAGAGTGTTGACCCGGTGTTTACGGTGTTTCATAAAAAGACAGAAACATTCTCTACATTATGGAGCCGTTACTCAGAAGATATAACCTGCTTTATGTCGGATTATACGGTAATGATGGCAGAGTATCAGGATAATACACGGATGTTTCCGCAGGGTAATCTGCCGGAAAATCATCTGAATATATCGTCATTACCGTGGGTTGAATTTGATGGGTTTAATTTAAATATAGCTGATTTTACTGATTATTTTTCGCCAATATTTACCATGGCAAAGTTTTATCAGGAGGGCGACAGAATATTGTTACCGCTTTCAGTACAAGTTCACCATGCCGCCTGTGACGGGTTTCATGTAGCAAAATTTATTAATAAGCTACAGTGTGCGTGTGATAACGTTATGAAATAAAACAATTAGTTTTATTGAAAACCGTCTTCCGATCCCGGATAGATGGTTTT