Homologs in group_1664

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_11555 FBDBKF_11555 46.7 Morganella morganii S1 catA2 type A-2 chloramphenicol O-acetyltransferase CatII
EHELCC_17475 EHELCC_17475 46.7 Morganella morganii S2 catA2 type A-2 chloramphenicol O-acetyltransferase CatII
NLDBIP_18685 NLDBIP_18685 46.7 Morganella morganii S4 catA2 type A-2 chloramphenicol O-acetyltransferase CatII
LHKJJB_17915 LHKJJB_17915 46.7 Morganella morganii S3 catA2 type A-2 chloramphenicol O-acetyltransferase CatII
HKOGLL_18735 HKOGLL_18735 46.7 Morganella morganii S5 catA2 type A-2 chloramphenicol O-acetyltransferase CatII
F4V73_RS08120 F4V73_RS08120 46.7 Morganella psychrotolerans catA type A chloramphenicol O-acetyltransferase

Distribution of the homologs in the orthogroup group_1664

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1664

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P07641 5.07e-161 446 97 0 217 3 cat Chloramphenicol acetyltransferase Proteus mirabilis
P62580 2.3e-129 366 78 0 214 3 cat Chloramphenicol acetyltransferase Salmonella typhi
P62577 2.3e-129 366 78 0 214 1 cat Chloramphenicol acetyltransferase Escherichia coli
P62579 2.3e-129 366 78 0 214 3 cat Chloramphenicol acetyltransferase Acinetobacter baumannii
P62578 2.3e-129 366 78 0 214 3 cat Chloramphenicol acetyltransferase Acinetobacter calcoaceticus subsp. anitratus
P58777 2.71e-128 363 78 0 214 1 cat Chloramphenicol acetyltransferase Klebsiella sp.
P00484 1.09e-75 230 48 1 213 1 cat3 Chloramphenicol acetyltransferase 3 Escherichia coli
P22615 5.2e-73 223 46 1 213 1 cmlA Chloramphenicol acetyltransferase 2 Escherichia coli
P22616 4.77e-71 218 45 1 213 3 cat-IIH Chloramphenicol acetyltransferase 2 Haemophilus influenzae
P26825 3.2e-68 211 45 2 207 3 catQ Chloramphenicol acetyltransferase Clostridium perfringens
Q02736 9.22e-68 210 46 2 207 3 catB Chloramphenicol acetyltransferase Clostridium butyricum
P26826 2.66e-63 198 47 3 202 3 catP Chloramphenicol acetyltransferase Clostridium perfringens
P22782 1.74e-60 191 44 3 204 3 None Chloramphenicol acetyltransferase Campylobacter coli
P11504 1.96e-57 183 46 3 202 3 catD Chloramphenicol acetyltransferase Clostridioides difficile
P00486 2.48e-56 181 40 3 206 3 cat Chloramphenicol acetyltransferase Staphylococcus aureus
P49417 4.75e-56 180 44 3 204 3 cat Chloramphenicol acetyltransferase Vibrio anguillarum
P36882 8.95e-56 179 40 3 206 1 cat Chloramphenicol acetyltransferase Staphylococcus aureus
Q03058 1.17e-55 179 40 3 206 3 cat Chloramphenicol acetyltransferase Streptococcus agalactiae
P06135 2.96e-55 178 39 3 211 2 cat Chloramphenicol acetyltransferase Staphylococcus aureus
P25309 3.56e-55 178 40 3 206 3 cat Chloramphenicol acetyltransferase Staphylococcus intermedius
P36883 7.46e-55 177 40 3 207 3 None Chloramphenicol acetyltransferase Staphylococcus aureus
P00487 8.96e-55 177 41 2 201 2 cat86 Chloramphenicol acetyltransferase Bacillus pumilus
P20074 6.27e-53 172 35 2 211 3 cat Chloramphenicol acetyltransferase Streptomyces acrimycini
P00485 4.93e-52 170 41 3 211 2 cat Chloramphenicol acetyltransferase Staphylococcus aureus

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS03580
Feature type CDS
Gene catA
Product type A chloramphenicol O-acetyltransferase
Location 802273 - 802926 (strand: -1)
Length 654 (nucleotides) / 217 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1664
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00302 Chloramphenicol acetyltransferase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4845 Defense mechanisms (V) V Chloramphenicol O-acetyltransferase

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K19271 chloramphenicol O-acetyltransferase type A [EC:2.3.1.28] - -

AMR gene Annotation(s)

Gene Description Scope Type Class Subclass HMM
catA type A-4 chloramphenicol O-acetyltransferase || type A chloramphenicol O-acetyltransferase core AMR PHENICOL CHLORAMPHENICOL NF000491 

Protein Sequence

MDTKRVGYTVVDLSQWGRKEHFEAFQSFAQCTFSQTVQLDITSLLKTVKQNGYKFYPTFIYIISLLVNKHAEFRMAMKDGELVIWDSVNPGYTIFHEQTETFSSLWSYYHKDINHFLKTYSEDIAQYGDDLAYFPKEFIENMFFVSANPWVSFTSFNLNVANINNFFAPVFTIGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRLLNEIQQYCDEGCK

Flanking regions ( +/- flanking 50bp)

AAGTAATATACAATTAATTTAAATTTGGATTAGAAAATAGGAAAGCTAATATGGACACAAAGCGCGTGGGATATACTGTTGTTGATCTATCCCAATGGGGACGAAAAGAACACTTTGAAGCATTTCAGTCTTTTGCTCAATGCACCTTTAGCCAGACCGTTCAACTGGATATTACTTCATTATTAAAAACCGTAAAGCAAAATGGGTACAAATTCTATCCGACATTTATATACATCATTAGCCTATTGGTAAATAAACATGCAGAATTCCGCATGGCAATGAAAGACGGGGAATTGGTGATATGGGATAGTGTTAACCCTGGGTATACTATCTTTCATGAACAGACCGAAACATTTTCATCTTTATGGAGTTACTACCACAAAGATATCAATCATTTTTTGAAAACTTATTCAGAAGATATAGCACAATACGGTGACGATCTAGCCTATTTTCCAAAAGAATTTATCGAAAATATGTTTTTTGTGTCAGCAAATCCTTGGGTAAGTTTCACCAGTTTTAACTTGAATGTGGCGAATATAAACAATTTCTTTGCCCCTGTATTTACAATAGGTAAATATTATACGCAAGGAGATAAAGTTCTGATGCCACTAGCAATTCAAGTGCATCATGCCGTATGTGATGGCTTCCATGTAGGCAGATTACTCAATGAAATACAGCAATACTGCGATGAGGGATGTAAATAATCAATGGGACTTAAAGCACATGTTTTTGTTCCACTCAAACCTGTCGCTAT