Homologs in group_1681

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_11730 FBDBKF_11730 83.0 Morganella morganii S1 efeB iron uptake transporter deferrochelatase/peroxidase subunit
EHELCC_17650 EHELCC_17650 83.0 Morganella morganii S2 efeB iron uptake transporter deferrochelatase/peroxidase subunit
NLDBIP_19320 NLDBIP_19320 83.0 Morganella morganii S4 efeB iron uptake transporter deferrochelatase/peroxidase subunit
LHKJJB_18090 LHKJJB_18090 83.0 Morganella morganii S3 efeB iron uptake transporter deferrochelatase/peroxidase subunit
HKOGLL_18990 HKOGLL_18990 83.0 Morganella morganii S5 efeB iron uptake transporter deferrochelatase/peroxidase subunit
PMI_RS00835 PMI_RS00835 64.8 Proteus mirabilis HI4320 efeB iron uptake transporter deferrochelatase/peroxidase subunit

Distribution of the homologs in the orthogroup group_1681

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1681

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q0TJ48 3.61e-135 397 46 4 412 3 efeB Deferrochelatase Escherichia coli O6:K15:H31 (strain 536 / UPEC)
Q1RDJ8 2.67e-134 395 46 4 412 3 efeB Deferrochelatase Escherichia coli (strain UTI89 / UPEC)
Q8CW71 2.67e-134 395 46 4 412 2 efeB Deferrochelatase Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P31545 3.87e-134 395 46 4 412 1 efeB Deferrochelatase Escherichia coli (strain K12)
Q8XAS4 3.91e-134 395 46 4 412 1 efeB Deferrochelatase Escherichia coli O157:H7
Q31Z86 4.46e-134 395 46 4 412 3 efeB Deferrochelatase Shigella boydii serotype 4 (strain Sb227)
Q3Z396 1.96e-133 393 46 4 412 3 efeB Deferrochelatase Shigella sonnei (strain Ss046)
A1A9S3 4.83e-133 392 46 4 412 3 efeB Deferrochelatase Escherichia coli O1:K1 / APEC
Q83LK4 8.8e-132 389 45 4 414 3 efeB Deferrochelatase Shigella flexneri
Q0T616 8.8e-132 389 45 4 414 3 efeB Deferrochelatase Shigella flexneri serotype 5b (strain 8401)
Q66BP4 6.92e-130 384 44 4 420 3 efeB Deferrochelatase Yersinia pseudotuberculosis serotype I (strain IP32953)
Q1CHD5 1e-129 384 44 4 420 3 efeB Deferrochelatase Yersinia pestis bv. Antiqua (strain Nepal516)
Q7CI09 1e-129 384 44 4 420 3 efeB Deferrochelatase Yersinia pestis
P39597 5.75e-72 235 34 11 421 1 efeB Deferrochelatase Bacillus subtilis (strain 168)
Q47KB1 5.55e-30 124 29 16 429 1 Tfu_3078 Dye-decolorizing peroxidase Tfu_3078 Thermobifida fusca (strain YX)
C0ZVK5 7.71e-05 48 27 11 232 1 RER_59910 Dye-decolorizing peroxidase Rhodococcus erythropolis (strain PR4 / NBRC 100887)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS07965
Feature type CDS
Gene efeB
Product iron uptake transporter deferrochelatase/peroxidase subunit
Location 1660986 - 1662293 (strand: -1)
Length 1308 (nucleotides) / 435 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1681
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF04261 Dyp-type peroxidase, N-terminal
PF20628 Dyp-type peroxidase, C-terminal

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2837 Inorganic ion transport and metabolism (P) P Periplasmic deferrochelatase/peroxidase EfeB

Protein Sequence

MKRGKECNTGGDETVSLSKRSTLKWLGAGSVLLSGGVFALPAVAKSDNTACDNTPRLREIPYLGKHQAGVITPEQKEAVFLSLNLTVKTRDEVDGVFKRLTACIADLTRNRKAGKTAGDRMPPAESGILGTYLTADELTVTVSLGHSLFDDRFGFSHVKPQNFVEMTAFPNDRLDPDWCGGDILLQFCANSRETVIYALREVLRRLSGSVAPLWKIDGFLPARDIECRTTPVNLFGFKDGTGNGDAGDAALMDDLVWITKPEPSWIENGSYQAVRLIRFELEFWDRTPLEDQENDFGRHKATGAPMGKAREHDDPEFQRDPHGDRVLFDSHMRRAEPRTTERHVSKLRRRSYSYSLGLTPSGQLDMGLIFISFQNDLKKGFISTQKRLNGEPLERYIKPFGGGYYLVLPGISSAQNYIGESLMNAARTQAVSPAD

Flanking regions ( +/- flanking 50bp)

CTGCGCGCTGAACTGAATATTGATGTGTATTACAAATACCGGAAAGAACCATGAAACGCGGAAAAGAATGCAATACAGGCGGTGACGAAACAGTCAGCCTGAGTAAACGCAGTACACTGAAATGGCTTGGCGCGGGAAGCGTACTGTTATCCGGCGGGGTGTTTGCCCTTCCTGCTGTTGCAAAATCTGACAATACTGCGTGTGATAACACACCACGCCTGCGTGAAATTCCGTATCTGGGAAAACATCAGGCGGGTGTGATAACTCCGGAACAAAAAGAAGCCGTTTTTCTCTCGCTGAATCTGACGGTAAAAACCCGGGATGAAGTTGACGGCGTATTTAAGCGCCTGACAGCCTGTATAGCGGATCTCACCCGTAACCGGAAAGCAGGAAAAACAGCCGGTGACCGGATGCCGCCGGCAGAATCCGGAATACTCGGCACCTACCTCACTGCAGATGAACTCACCGTAACGGTTTCACTGGGTCATTCACTGTTTGATGACCGCTTCGGTTTTTCTCATGTCAAACCACAGAACTTTGTTGAAATGACGGCATTTCCGAATGACCGTCTTGATCCGGACTGGTGCGGCGGCGATATTTTATTACAGTTTTGTGCCAACAGTCGTGAGACAGTGATTTATGCGTTGCGCGAAGTACTGCGCCGTCTCTCAGGTTCTGTGGCACCATTGTGGAAAATTGACGGTTTTCTGCCTGCGCGGGATATTGAGTGCCGGACTACCCCGGTTAATTTATTTGGTTTCAAAGACGGAACCGGAAACGGGGATGCCGGTGATGCGGCACTGATGGATGACCTGGTCTGGATAACCAAACCGGAACCATCCTGGATTGAAAACGGCAGTTATCAGGCAGTGCGCCTGATCCGTTTTGAACTGGAATTCTGGGACAGAACCCCGCTGGAAGATCAGGAAAATGATTTCGGGCGTCATAAAGCAACAGGTGCGCCGATGGGCAAAGCCCGCGAGCATGATGATCCTGAGTTTCAGCGCGATCCCCACGGTGACCGTGTACTGTTTGACTCTCACATGCGCCGCGCCGAACCCCGGACTACAGAAAGACATGTTTCAAAATTGCGTCGTCGTAGTTATAGTTACTCCCTGGGGCTGACGCCGTCAGGGCAACTTGATATGGGTCTGATTTTTATTTCATTTCAGAATGATTTAAAAAAAGGATTTATCAGCACGCAAAAACGCCTGAACGGCGAACCGCTTGAGCGCTATATCAAACCGTTCGGTGGCGGCTATTATCTGGTCTTGCCCGGGATCTCATCCGCACAGAATTATATCGGCGAAAGTCTGATGAACGCGGCACGGACACAGGCGGTATCACCGGCAGACTAAACGGACAGGGACAGCATGGGCAACAACGGAACTCTTCATCTTTTTGACAG