Homologs in group_1681

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_11730 FBDBKF_11730 64.8 Morganella morganii S1 efeB iron uptake transporter deferrochelatase/peroxidase subunit
EHELCC_17650 EHELCC_17650 64.8 Morganella morganii S2 efeB iron uptake transporter deferrochelatase/peroxidase subunit
NLDBIP_19320 NLDBIP_19320 64.8 Morganella morganii S4 efeB iron uptake transporter deferrochelatase/peroxidase subunit
LHKJJB_18090 LHKJJB_18090 64.8 Morganella morganii S3 efeB iron uptake transporter deferrochelatase/peroxidase subunit
HKOGLL_18990 HKOGLL_18990 64.8 Morganella morganii S5 efeB iron uptake transporter deferrochelatase/peroxidase subunit
F4V73_RS07965 F4V73_RS07965 64.8 Morganella psychrotolerans efeB iron uptake transporter deferrochelatase/peroxidase subunit

Distribution of the homologs in the orthogroup group_1681

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_1681

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q8XAS4 4.25e-146 425 50 2 408 1 efeB Deferrochelatase Escherichia coli O157:H7
Q31Z86 4.68e-146 425 50 2 408 3 efeB Deferrochelatase Shigella boydii serotype 4 (strain Sb227)
Q0TJ48 5.06e-146 424 50 2 408 3 efeB Deferrochelatase Escherichia coli O6:K15:H31 (strain 536 / UPEC)
Q1RDJ8 8.35e-146 424 50 2 408 3 efeB Deferrochelatase Escherichia coli (strain UTI89 / UPEC)
Q8CW71 8.35e-146 424 50 2 408 2 efeB Deferrochelatase Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P31545 8.91e-146 424 50 2 408 1 efeB Deferrochelatase Escherichia coli (strain K12)
Q3Z396 1.79e-145 423 50 2 408 3 efeB Deferrochelatase Shigella sonnei (strain Ss046)
A1A9S3 1.29e-144 421 50 2 408 3 efeB Deferrochelatase Escherichia coli O1:K1 / APEC
Q83LK4 1.41e-143 418 50 3 407 3 efeB Deferrochelatase Shigella flexneri
Q0T616 1.41e-143 418 50 3 407 3 efeB Deferrochelatase Shigella flexneri serotype 5b (strain 8401)
Q66BP4 2.11e-136 400 47 6 407 3 efeB Deferrochelatase Yersinia pseudotuberculosis serotype I (strain IP32953)
Q1CHD5 5.26e-136 399 47 6 407 3 efeB Deferrochelatase Yersinia pestis bv. Antiqua (strain Nepal516)
Q7CI09 5.26e-136 399 47 6 407 3 efeB Deferrochelatase Yersinia pestis
P39597 9.52e-80 255 35 12 424 1 efeB Deferrochelatase Bacillus subtilis (strain 168)
Q47KB1 6.2e-37 142 32 12 359 1 Tfu_3078 Dye-decolorizing peroxidase Tfu_3078 Thermobifida fusca (strain YX)
I2DBY1 0.000141 47 23 7 208 1 dyp1 Dye-decolorizing peroxidase AauDyP1 Auricularia auricula-judae

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS00835
Feature type CDS
Gene efeB
Product iron uptake transporter deferrochelatase/peroxidase subunit
Location 209535 - 210803 (strand: -1)
Length 1269 (nucleotides) / 422 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1681
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF04261 Dyp-type peroxidase, N-terminal
PF20628 Dyp-type peroxidase, C-terminal

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2837 Inorganic ion transport and metabolism (P) P Periplasmic deferrochelatase/peroxidase EfeB

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K16301 deferrochelatase/peroxidase EfeB [EC:1.11.1.-] - -

Protein Sequence

MVKNKTLFKSLLTIPVNHHKRTTLKWLGGSLLLASMGANAIEKSKCSPTLRYQRAINYLGKHQAGVITPEQKHASFIALDLTVTTPEEVEKIFRTLTQRIAFLTQSRELKESHNPHLPPAGSGILGSQLYPDELTITVALGDSFFDNRFGFQAHKPKRLEAMKPFPNDRLDPKWCGGDLLLQLCANSQESIIYALRDILKYLSGQVHARWKIDGFLPARDIDNQQTPINLFGFKDGTGNAPATDTHLMDDLVWITDKQNEPQWCLGGSYQAVRLIRFALEFWDRTPLEDQENNFGRHRATGAPIGMKQEMDSPEFAQDPHGDRILFDSHMRRAEPRTPERYSAKLRRRSYSYSLGLTPSGQLDMGLVFVSFQNNLKKGFIDTQKRLNGEPLERYIKPFGGGYYFVLPGVTQASDILAKGLFT

Flanking regions ( +/- flanking 50bp)

ATTACGTAACGTGCTCAATATTGATGTCTATTATTACTATAAAGAAGCATATGGTGAAAAATAAAACTCTGTTTAAATCACTCCTCACAATCCCCGTTAACCACCATAAACGTACAACGTTAAAATGGTTAGGCGGTAGTTTACTGCTTGCCAGTATGGGCGCAAATGCCATCGAAAAAAGCAAGTGTTCACCAACACTTCGTTATCAACGTGCTATTAACTACTTAGGAAAACATCAAGCTGGGGTTATCACGCCAGAACAAAAGCATGCTTCATTTATTGCACTTGATTTAACAGTAACAACCCCTGAGGAAGTAGAAAAAATTTTCCGAACGTTAACACAGCGGATTGCTTTTTTAACACAATCTCGTGAACTTAAAGAAAGTCATAATCCTCACCTTCCCCCCGCAGGATCCGGTATTTTAGGTAGCCAATTATATCCTGATGAATTAACCATCACAGTGGCGTTAGGGGATAGTTTTTTTGATAATCGGTTTGGTTTTCAAGCTCATAAACCCAAACGCCTTGAAGCAATGAAACCCTTCCCCAACGATCGCTTAGATCCTAAATGGTGTGGCGGTGATCTGTTACTTCAGCTTTGTGCCAATAGTCAAGAAAGTATCATTTATGCATTAAGAGATATTTTAAAATATCTTTCTGGGCAAGTGCATGCACGATGGAAAATAGATGGTTTTCTACCTGCTCGTGATATTGATAATCAACAAACGCCAATTAATTTATTTGGTTTTAAAGATGGCACAGGTAATGCCCCTGCCACTGACACTCATTTAATGGATGATTTAGTGTGGATCACCGATAAACAAAATGAACCGCAATGGTGCTTAGGAGGTAGCTATCAAGCGGTGAGACTTATTCGTTTTGCCTTGGAATTTTGGGATAGAACACCTCTTGAAGATCAGGAGAATAACTTTGGCCGTCATCGTGCAACAGGCGCGCCGATAGGTATGAAGCAAGAAATGGACTCACCTGAATTTGCGCAAGATCCTCATGGCGACAGGATACTCTTTGATTCACATATGAGACGAGCTGAGCCCAGAACCCCCGAACGTTATAGTGCCAAACTGCGTCGTCGCAGTTATAGCTACTCATTAGGGCTAACGCCGTCAGGGCAATTAGATATGGGGCTTGTCTTTGTCTCATTTCAGAATAACCTTAAAAAAGGCTTTATTGATACGCAAAAGCGTTTAAATGGCGAGCCGTTAGAGCGCTATATAAAACCTTTTGGTGGGGGTTATTACTTCGTATTACCCGGTGTCACACAAGCAAGCGATATATTAGCTAAAGGACTATTTACTTAATTTTTGCTATTTTCAAATACGTTTACTTTTCCAGTAAACGTATTTGATAA