Homologs in group_1972

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_14790 FBDBKF_14790 94.6 Morganella morganii S1 potE Serine transporter YbeC, amino acid:H+ symporter family
EHELCC_15595 EHELCC_15595 94.6 Morganella morganii S2 potE Serine transporter YbeC, amino acid:H+ symporter family
NLDBIP_16125 NLDBIP_16125 94.6 Morganella morganii S4 potE Serine transporter YbeC, amino acid:H+ symporter family
LHKJJB_15715 LHKJJB_15715 94.6 Morganella morganii S3 potE Serine transporter YbeC, amino acid:H+ symporter family
HKOGLL_14835 HKOGLL_14835 94.6 Morganella morganii S5 potE Serine transporter YbeC, amino acid:H+ symporter family
PMI_RS04140 PMI_RS04140 84.7 Proteus mirabilis HI4320 - APC family permease

Distribution of the homologs in the orthogroup group_1972

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1972

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AA47 0.0 627 69 0 450 1 plaP Low-affinity putrescine importer PlaP Escherichia coli (strain K12)
P0AA48 0.0 627 69 0 450 3 plaP Low-affinity putrescine importer PlaP Escherichia coli O157:H7
P76037 0.0 587 61 0 447 1 puuP Putrescine importer PuuP Escherichia coli (strain K12)
P37103 1.03e-86 266 70 0 195 3 plaP Probable low-affinity putrescine importer PlaP (Fragment) Klebsiella pneumoniae
Q8W4K3 2.14e-23 106 26 12 414 1 CAT4 Cationic amino acid transporter 4, vacuolar Arabidopsis thaliana
Q797A7 4.52e-23 104 26 17 454 3 mtrA Methylthioribose transporter Bacillus subtilis (strain 168)
O07576 3.67e-19 93 23 12 409 1 bcaP Branched-chain amino acid permease BcaP Bacillus subtilis (strain 168)
Q8GYB4 2.72e-18 91 24 11 405 2 CAT3 Cationic amino acid transporter 3, mitochondrial Arabidopsis thaliana
A2RHI9 3.55e-18 90 25 16 463 1 bcaP Branched-chain amino acid permease BcaP Lactococcus lactis subsp. cremoris (strain MG1363)
Q9ASS7 2.23e-17 88 24 13 406 1 CAT2 Cationic amino acid transporter 2, vacuolar Arabidopsis thaliana
Q9C5D6 3.96e-16 84 24 15 411 2 CAT9 Cationic amino acid transporter 9, chloroplastic Arabidopsis thaliana
P30825 3.64e-15 81 24 12 447 1 SLC7A1 High affinity cationic amino acid transporter 1 Homo sapiens
Q8BLQ7 4.3e-14 78 26 13 409 1 Slc7a4 Cationic amino acid transporter 4 Mus musculus
A2RI97 1.47e-13 76 23 8 336 3 hisP Histidine permease HisP Lactococcus lactis subsp. cremoris (strain MG1363)
P25737 3.83e-13 74 24 7 301 1 lysP Lysine-specific permease LysP Escherichia coli (strain K12)
Q8TBB6 1.74e-12 73 24 14 399 1 SLC7A14 Solute carrier family 7 member 14 Homo sapiens
B0UYF2 1.82e-12 73 25 18 411 3 slc7a14a Probable cationic amino acid transporter Danio rerio
Q8WY07 1.89e-12 73 21 11 432 1 SLC7A3 Cationic amino acid transporter 3 Homo sapiens
P30823 6.1e-12 71 23 14 437 2 Slc7a1 High affinity cationic amino acid transporter 1 Rattus norvegicus
O34560 6.74e-12 70 25 9 274 3 yecA Uncharacterized amino acid permease YecA Bacillus subtilis (strain 168)
P45539 6.99e-12 70 23 10 330 2 frlA Probable fructoselysine/psicoselysine transporter FrlA Escherichia coli (strain K12)
Q8X845 8.21e-12 70 23 10 330 3 frlA Probable fructoselysine/psicoselysine transporter FrlA Escherichia coli O157:H7
A2RNZ6 1.26e-11 70 22 20 505 1 lysP Lysine-specific permease LysP Lactococcus lactis subsp. cremoris (strain MG1363)
Q09143 1.46e-11 70 22 13 431 1 Slc7a1 High affinity cationic amino acid transporter 1 Mus musculus
A0JNI9 1.58e-11 70 23 15 411 2 SLC7A14 Solute carrier family 7 member 14 Bos taurus
O43246 2.4e-11 69 24 10 406 1 SLC7A4 Cationic amino acid transporter 4 Homo sapiens
Q8BXR1 2.52e-11 69 23 14 409 1 Slc7a14 Solute carrier family 7 member 14 Mus musculus
Q09887 2.54e-11 69 22 10 380 3 SPCC584.13 Uncharacterized amino-acid permease C584.13 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q45577 5.19e-11 68 23 9 313 1 aimA Glutamate/serine transporter AimA Bacillus subtilis (strain 168)
B3TP03 5.43e-11 68 22 14 418 2 SLC7A2 Cationic amino acid transporter 2 Gallus gallus
P63350 7.9e-11 67 24 10 437 3 BQ2027_MB2022C Uncharacterized transporter Mb2022c Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P9WQM3 7.9e-11 67 24 10 437 1 Rv1999c Uncharacterized transporter Rv1999c Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WQM2 7.9e-11 67 24 10 437 3 MT2055 Uncharacterized transporter MT2055 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
Q9SQZ0 1.14e-10 67 23 13 410 3 CAT7 Cationic amino acid transporter 7, chloroplastic Arabidopsis thaliana
Q9LZ20 1.38e-10 67 22 15 444 2 CAT6 Cationic amino acid transporter 6, chloroplastic Arabidopsis thaliana
Q6DCE8 1.85e-10 66 23 15 425 2 slc7a2 Cationic amino acid transporter 2 Xenopus laevis
P24207 2.07e-10 66 24 2 237 1 pheP Phenylalanine-specific permease Escherichia coli (strain K12)
P52569 3.1e-10 66 22 11 412 1 SLC7A2 Cationic amino acid transporter 2 Homo sapiens
Q9US40 4.17e-10 65 24 10 343 3 SPAC1039.01 Uncharacterized amino-acid permease C1039.01 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P18581 8.19e-10 64 22 12 409 1 Slc7a2 Cationic amino acid transporter 2 Mus musculus
Q9Z1K8 1.01e-09 64 24 12 338 1 Slc7a7 Y+L amino acid transporter 1 Mus musculus
A8I499 1.02e-09 64 22 13 410 2 SLC7A2 Cationic amino acid transporter 2 Sus scrofa
P59737 1.04e-09 63 27 1 186 3 aroP Aromatic amino acid transport protein AroP Shigella flexneri
Q8X968 1.16e-09 63 27 1 186 3 aroP Aromatic amino acid transport protein AroP Escherichia coli O157:H7
B5D5N9 1.46e-09 63 22 12 409 1 Slc7a2 Cationic amino acid transporter 2 Rattus norvegicus
Q28I80 1.47e-09 63 25 11 333 2 slc7a6 Y+L amino acid transporter 2 Xenopus tropicalis
P15993 1.65e-09 63 27 1 186 1 aroP Aromatic amino acid transport protein AroP Escherichia coli (strain K12)
Q9R0S5 1.86e-09 63 24 12 340 1 Slc7a7 Y+L amino acid transporter 1 Rattus norvegicus
Q9UM01 1.99e-09 63 22 11 344 1 SLC7A7 Y+L amino acid transporter 1 Homo sapiens
Q8FL49 5.74e-09 61 27 1 186 3 aroP Aromatic amino acid transport protein AroP Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P37460 6.27e-09 61 22 5 326 3 proY Proline-specific permease ProY Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q5AG77 8.46e-09 61 23 11 386 2 GAP1 Amino-acid permease GAP1 Candida albicans (strain SC5314 / ATCC MYA-2876)
A1L3M3 8.56e-09 61 24 11 333 2 slc7a6 Y+L amino acid transporter 2 Xenopus laevis
Q47689 1.16e-08 60 24 15 424 3 mmuP Probable S-methylmethionine permease Escherichia coli (strain K12)
Q5PR34 1.19e-08 60 21 9 415 2 slc7a2 Cationic amino acid transporter 2 Danio rerio
P40901 6.05e-08 58 25 17 417 2 isp5 Sexual differentiation process putative amino-acid permease isp5 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P0CK99 9.25e-08 57 25 1 186 3 aroP Aromatic amino acid transport protein AroP Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
E1W822 9.25e-08 57 25 1 186 3 aroP Aromatic amino acid transport protein AroP Salmonella typhimurium (strain SL1344)
P0A188 9.25e-08 57 25 1 186 3 None Aromatic amino acid transport protein AroP Salmonella typhi
Q92536 1.14e-07 57 24 10 344 1 SLC7A6 Y+L amino acid transporter 2 Homo sapiens
Q59I64 1.92e-07 57 23 11 338 2 slc7a6 Y+L amino acid transporter 2 Danio rerio
P0AAE2 1.99e-07 57 23 4 264 1 proY Proline-specific permease ProY Escherichia coli (strain K12)
P0AAE3 1.99e-07 57 23 4 264 3 proY Proline-specific permease ProY Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AAE4 1.99e-07 57 23 4 264 3 proY Proline-specific permease ProY Escherichia coli O157:H7
O74537 2.08e-07 57 25 14 366 3 SPCC74.04 Uncharacterized amino-acid permease C74.04 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q9WTR6 2.14e-07 57 24 17 414 1 Slc7a11 Cystine/glutamate transporter Mus musculus
Q8BGK6 2.22e-07 57 23 13 411 1 Slc7a6 Y+L amino acid transporter 2 Mus musculus
D3ZMM8 2.86e-07 56 23 9 338 1 Slc7a6 Y+L amino acid transporter 2 Rattus norvegicus
O34618 3.17e-07 56 22 3 235 3 ytnA Uncharacterized amino acid permease YtnA Bacillus subtilis (strain 168)
P39137 3.4e-07 56 26 6 252 2 rocE Amino-acid permease RocE Bacillus subtilis (strain 168)
Q84MA5 7.98e-07 55 20 19 454 1 CAT1 Cationic amino acid transporter 1 Arabidopsis thaliana
P40812 1.06e-06 54 23 3 176 3 ansP L-asparagine permease Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P94383 1.22e-06 54 23 9 309 3 ycgH Uncharacterized transporter YcgH Bacillus subtilis (strain 168)
O53092 1.23e-06 54 22 14 364 3 arcD Arginine/ornithine antiporter Latilactobacillus sakei
Q5RAG7 1.24e-06 54 23 16 417 2 SLC7A11 Cystine/glutamate transporter Pongo abelii
Q9UPY5 1.29e-06 54 23 16 417 1 SLC7A11 Cystine/glutamate transporter Homo sapiens
P96704 1.46e-06 54 23 6 269 3 ydgF Uncharacterized transporter YdgF Bacillus subtilis (strain 168)
O74248 1.52e-06 54 30 6 137 3 GPT1 Putative polyamine transporter Candida albicans
P39636 1.63e-06 53 25 9 248 2 rocC Amino-acid permease RocC Bacillus subtilis (strain 168)
Q91WN3 1.74e-06 53 22 12 367 1 Slc7a13 Solute carrier family 7 member 13 Mus musculus
Q9I703 1.81e-06 53 23 2 235 2 bauD Probable GABA permease Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q6Z8D0 4.53e-06 52 25 11 321 1 PUT1 Polyamine transporter PUT1 Oryza sativa subsp. japonica
A2X8M8 4.53e-06 52 25 11 321 3 PUT1 Polyamine transporter PUT1 Oryza sativa subsp. indica
Q58026 8.07e-06 51 23 11 347 1 MJ0609 Uncharacterized protein MJ0609 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
O31462 1.32e-05 51 20 8 335 3 ybgF Uncharacterized amino acid permease YbgF Bacillus subtilis (strain 168)
P0AAE0 1.35e-05 51 21 7 276 1 cycA D-serine/D-alanine/glycine transporter Escherichia coli (strain K12)
P0AAE1 1.35e-05 51 21 7 276 3 cycA D-serine/D-alanine/glycine transporter Escherichia coli O157:H7
O32257 3.82e-05 49 22 8 335 2 yvbW Uncharacterized amino acid permease YvbW Bacillus subtilis (strain 168)
O64759 4.45e-05 49 26 12 247 1 CAT5 Cationic amino acid transporter 5 Arabidopsis thaliana
Q9P768 5.26e-05 49 25 12 295 3 SPAP7G5.06 Uncharacterized amino-acid permease P7G5.06 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P9WQM5 9.5e-05 48 22 11 401 1 Rv1979c Uncharacterized transporter Rv1979c Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WQM4 9.5e-05 48 22 11 401 3 MT2031 Uncharacterized transporter MT2031 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P63116 0.00014 48 20 11 363 1 Slc7a10 Asc-type amino acid transporter 1 Rattus norvegicus
P63115 0.00014 48 20 11 363 1 Slc7a10 Asc-type amino acid transporter 1 Mus musculus
Q8VIE6 0.000142 47 23 12 339 1 Slc7a12 Solute carrier family 7 member 12 Mus musculus
P54425 0.000207 47 27 0 86 3 ybxG Probable threonine/serine transporter YbxG Bacillus subtilis (strain 168)
P46349 0.000209 47 23 3 233 1 gabP Gamma-aminobutyric acid permease Bacillus subtilis (strain 168)
P27837 0.000224 47 24 0 125 1 yifK Probable transport protein YifK Escherichia coli (strain K12)
P77610 0.000346 46 22 4 177 3 ansP L-asparagine permease Escherichia coli (strain K12)
Q7TZ67 0.000371 46 22 11 401 3 BQ2027_MB2001C Uncharacterized transporter Mb2001c Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
Q9P5N4 0.000465 46 24 4 184 3 SPBC359.01 Uncharacterized amino-acid permease C359.01 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
A0A1D8PN88 0.000531 46 22 7 297 2 HIP1 Amino-acid permease GAP3 Candida albicans (strain SC5314 / ATCC MYA-2876)
O34739 0.000659 45 22 14 378 1 steT Serine/threonine exchanger SteT Bacillus subtilis (strain 168)
P0A189 0.000852 45 28 0 103 3 yifK Probable transport protein YifK Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A190 0.000852 45 28 0 103 3 yifK Probable transport protein YifK Salmonella typhi

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS07585
Feature type CDS
Gene -
Product APC family permease
Location 1585564 - 1586943 (strand: -1)
Length 1380 (nucleotides) / 459 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1972
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF13520 Amino acid permease

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0531 Amino acid transport and metabolism (E) E Serine transporter YbeC, amino acid:H+ symporter family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K14052 putrescine importer - -

Protein Sequence

MSDNIALNIGRNRTGANNRVQLAKTLTLVQVVMMGLAYLQPMTIFDTFGIVSEITSGHVATSYAIALTAILFTALSYGKLVKRFPSAGSAYTYAQKSMSPHIGFMVGWSSLLDYLFMPMINILLAKIYLQAIFPECPTWVFVGGLVFLMTLFNLRGINVVANLNTVIVVVQVAVMIIFVGLLIRGVSGGEGAGSLLSFRPFASIDAELIPMISGATILCFSFLGFDGISSLSEETPNAGKVIPKAIFLTALIGGLIFIAVSYFLQLYFPDVSRFTNPEESQPEIMYMVAGAFFQSIILVFSCVTVLASGMAAQAGVSRLMYVMGRDGVFPEKFFGYVHPQWRTPALNVLLVGVLALSAVWFDLVTATALINFGALVAFTFVNLSVISQFWVRERRNKTLADHINYLILPVIGAATVTVLWFNLDAKSMELGLSWGALGLVYMLWLTRRFRRPMPQMPEQ

Flanking regions ( +/- flanking 50bp)

ATCTGATAGTAGTATCAGTATGATTGTCGGTGTTACGGGGGGATTCGCTCATGTCAGATAATATCGCCCTCAATATTGGCCGCAATCGTACTGGTGCCAATAACCGCGTTCAACTCGCAAAAACACTGACTCTCGTCCAGGTTGTCATGATGGGGCTTGCCTATCTGCAGCCGATGACTATCTTTGATACTTTCGGGATCGTGTCAGAAATTACCAGCGGTCATGTCGCGACGTCTTATGCTATCGCACTGACAGCCATTCTTTTTACTGCGCTGAGTTACGGCAAACTGGTCAAACGGTTCCCGTCCGCAGGCTCTGCGTATACCTATGCCCAGAAATCCATGAGTCCGCATATCGGCTTTATGGTAGGTTGGTCATCTCTGCTGGACTATTTGTTCATGCCGATGATCAATATTCTGCTGGCAAAAATTTATCTTCAGGCCATTTTCCCGGAATGCCCGACATGGGTCTTTGTCGGCGGGCTGGTCTTTTTGATGACATTATTCAATCTGCGCGGCATTAATGTCGTGGCAAACCTCAACACCGTGATTGTTGTGGTTCAGGTTGCGGTCATGATCATCTTTGTCGGCTTACTTATCCGTGGCGTGTCCGGCGGCGAAGGTGCAGGTTCACTGCTCTCATTCCGTCCGTTTGCCTCCATAGATGCTGAGCTTATTCCGATGATAAGCGGGGCGACGATACTGTGCTTCTCCTTCCTGGGATTTGACGGTATCAGTTCCCTGTCCGAAGAAACACCGAATGCCGGTAAAGTTATCCCGAAAGCGATTTTCCTGACGGCGCTGATTGGCGGCCTGATCTTTATCGCAGTGTCATACTTCCTGCAACTCTATTTCCCGGATGTATCGCGCTTTACTAATCCGGAAGAATCACAACCTGAAATCATGTATATGGTCGCCGGTGCATTCTTCCAGTCCATCATTCTGGTCTTCTCTTGTGTGACGGTACTGGCTTCCGGTATGGCAGCACAGGCAGGGGTATCCCGTCTGATGTATGTGATGGGGCGTGATGGCGTGTTCCCGGAGAAATTCTTCGGCTATGTTCACCCGCAATGGCGGACACCGGCACTGAATGTGCTGCTGGTCGGCGTGCTGGCACTGAGTGCAGTCTGGTTTGATCTGGTCACAGCGACCGCGCTGATTAACTTTGGTGCGCTGGTGGCATTCACCTTTGTGAACCTGTCTGTGATTTCTCAGTTCTGGGTTCGTGAGCGGCGTAATAAAACACTGGCTGATCATATTAATTATCTGATCCTGCCGGTTATTGGTGCCGCAACAGTAACCGTGCTCTGGTTCAATCTCGATGCTAAATCGATGGAATTAGGGCTGAGCTGGGGCGCATTGGGTCTTGTCTATATGTTATGGCTGACCCGCCGTTTCCGCCGTCCGATGCCGCAGATGCCCGAACAGTAATTGTCCGGCAGTTTACGCTGCATAACGGCGCACAGGTTGATTCTGTGCGC