Homologs in group_501

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_00960 FBDBKF_00960 88.3 Morganella morganii S1 - DUF2526 domain-containing protein
EHELCC_00585 EHELCC_00585 88.3 Morganella morganii S2 - DUF2526 domain-containing protein
NLDBIP_02875 NLDBIP_02875 88.3 Morganella morganii S4 - DUF2526 domain-containing protein
LHKJJB_04390 LHKJJB_04390 88.3 Morganella morganii S3 - DUF2526 domain-containing protein
HKOGLL_02655 HKOGLL_02655 88.3 Morganella morganii S5 - DUF2526 domain-containing protein
PMI_RS00800 PMI_RS00800 45.0 Proteus mirabilis HI4320 - DUF2526 family protein

Distribution of the homologs in the orthogroup group_501

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_501

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P64458 1.19e-09 51 49 0 59 4 ydcY Uncharacterized protein YdcY Shigella flexneri
P64455 1.19e-09 51 49 0 59 1 ydcY Uncharacterized protein YdcY Escherichia coli (strain K12)
P64456 1.19e-09 51 49 0 59 4 ydcY Uncharacterized protein YdcY Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P64457 1.19e-09 51 49 0 59 4 ydcY Uncharacterized protein YdcY Escherichia coli O157:H7

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS07040
Feature type CDS
Gene -
Product DUF2526 family protein
Location 1462202 - 1462384 (strand: 1)
Length 183 (nucleotides) / 60 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_501
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF10735 Protein of unknown function (DUF2526)

Protein Sequence

MSDYAQSEAAVEKAIESNNITAMNELMISLGDANPLPYEQRYELQQRLRQAIMDHGKVHH

Flanking regions ( +/- flanking 50bp)

CGTTCGGGTAGGATAAAACCATCAAAACCAGAAAGAGAAGGATAAAACAGATGAGTGATTATGCACAGAGTGAAGCTGCCGTGGAAAAAGCGATTGAGAGCAACAATATCACTGCAATGAATGAATTAATGATTAGCCTGGGTGACGCTAACCCGCTGCCGTACGAACAGCGTTATGAACTGCAACAGCGTCTGCGCCAGGCGATTATGGATCATGGAAAAGTACATCACTAGTTAATTTATATTCTGTGCCGGATATTATATAGAATAATCATCCGGCGCAG