Homologs in group_4065

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4065

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4065

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS07000
Feature type CDS
Gene -
Product type VI secretion system baseplate subunit TssG
Location 1453762 - 1454427 (strand: -1)
Length 666 (nucleotides) / 221 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_4065
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF06996 Type VI secretion, TssG

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3520 Intracellular trafficking, secretion, and vesicular transport (U) U Predicted component of the type VI protein secretion system

Protein Sequence

MKRRNPPGLLGSDGVLPRCITGRVAEYAQVHQQCAPQDFFRIFDKCCDTLQSNINKKQRVTADSTPETLPLTRLLQGLMPEDSVCYPGIGMTLSGNVRLRALSRLASAYFAQRTDFHYAPPVRVPYTPRAGTERLLGGGAMLGSHCLLRTAHLVMTIYADSLRVYDEWQPGGLRDRLCGQFLRTFLRRPVLWQVIIRPSAALILPAQLAVTPSLLGRNICL

Flanking regions ( +/- flanking 50bp)

GTGCGTGAAGCACATCACTGCCCGCTGAGATTGTCTGCTGAGATGAACGGATGAAGCGGCGTAATCCCCCCGGGCTGCTCGGCTCTGATGGTGTATTGCCCCGCTGTATTACCGGGCGGGTGGCGGAATACGCACAGGTGCATCAGCAGTGTGCACCACAGGATTTTTTCCGTATTTTTGATAAATGCTGCGACACATTACAGAGCAACATTAATAAAAAACAGCGGGTTACGGCTGATTCCACACCAGAGACATTACCCCTTACCCGGCTGTTACAGGGACTGATGCCTGAAGACAGCGTTTGTTACCCGGGAATAGGGATGACCCTGAGCGGCAATGTCCGGCTGCGCGCACTCAGCAGGCTGGCATCGGCTTATTTTGCACAGCGGACCGACTTTCACTATGCGCCGCCTGTCCGCGTGCCGTATACCCCGCGCGCGGGAACAGAACGGCTTCTCGGCGGCGGGGCGATGCTGGGCAGCCATTGTCTGCTTCGCACCGCACATCTGGTTATGACGATATATGCAGACAGTCTGCGGGTGTATGACGAGTGGCAGCCCGGCGGGCTGCGTGACCGGTTATGCGGGCAATTTCTCCGCACCTTTCTCCGCCGTCCGGTTTTGTGGCAGGTGATTATCCGCCCGTCAGCGGCACTGATACTCCCTGCGCAACTGGCTGTTACGCCATCATTATTGGGACGGAATATCTGTCTCTGACAAGGATCTGACAAGGAATAGTTATGCTGGCTATCGATTTAAACCATTTA