Homologs in group_227

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7 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_00825 FBDBKF_00825 87.4 Morganella morganii S1 sapB MgtC family protein
EHELCC_00720 EHELCC_00720 87.4 Morganella morganii S2 sapB MgtC family protein
NLDBIP_02740 NLDBIP_02740 87.4 Morganella morganii S4 sapB MgtC family protein
LHKJJB_04255 LHKJJB_04255 87.4 Morganella morganii S3 sapB MgtC family protein
HKOGLL_02790 HKOGLL_02790 87.4 Morganella morganii S5 sapB MgtC family protein
PMI_RS08170 PMI_RS08170 77.9 Proteus mirabilis HI4320 - MgtC family protein
PMI_RS14685 PMI_RS14685 33.9 Proteus mirabilis HI4320 - MgtC/SapB family protein

Distribution of the homologs in the orthogroup group_227

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_227

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q5PC53 1.16e-81 246 61 2 229 3 mgtC Protein MgtC Salmonella paratyphi A (strain ATCC 9150 / SARB42)
Q8Z2J2 1.28e-81 246 61 2 229 3 mgtC Protein MgtC Salmonella typhi
P0CI70 1.98e-81 246 61 2 229 2 mgtC Protein MgtC Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
D0ZLQ7 1.98e-81 246 61 2 229 1 mgtC Protein MgtC Salmonella typhimurium (strain 14028s / SGSC 2262)
Q57I71 2.93e-81 245 61 2 229 3 mgtC Protein MgtC Salmonella choleraesuis (strain SC-B67)
Q57208 1.64e-60 192 47 4 221 3 slr0014 Uncharacterized protein slr0014 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q8FXM5 1.16e-55 180 46 4 221 3 mgtC Protein MgtC Brucella suis biovar 1 (strain 1330)
Q8YDX1 1.16e-55 180 46 4 221 3 mgtC Protein MgtC Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)
Q57A43 1.16e-55 180 46 4 221 3 mgtC Protein MgtC Brucella abortus biovar 1 (strain 9-941)
Q2YIG0 1.16e-55 180 46 4 221 3 mgtC Protein MgtC Brucella abortus (strain 2308)
P0AFV2 2.79e-21 91 35 3 152 3 yhiD Putative magnesium transporter YhiD Escherichia coli (strain K12)
P0AFV3 2.79e-21 91 35 3 152 3 yhiD Uncharacterized protein YhiD Escherichia coli O157:H7
Q45514 1.89e-18 84 28 7 221 1 sapB Protein SapB Bacillus subtilis (strain 168)
Q57424 2.69e-14 72 40 2 124 3 HI_0647 Uncharacterized protein HI_0647 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q55026 4.91e-13 68 36 3 127 2 srpB Protein SrpB Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS06820
Feature type CDS
Gene -
Product MgtC family protein
Location 1417154 - 1417849 (strand: -1)
Length 696 (nucleotides) / 231 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_227
Orthogroup size 8
N. genomes 7

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Genomic region

Domains

PF02308 MgtC family
PF21770 MGTC/SAPB C-terminal domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1285 Inorganic ion transport and metabolism (P) P Magnesium uptake protein YhiD/SapB, involved in acid resistance

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07507 putative Mg2+ transporter-C (MgtC) family protein - -

Virulence factor Annotation(s)

VF gene ID Protein VF ID Category
VFG004046 Mg2+ transport protein VF0106 Nutritional/Metabolic factor

Protein Sequence

MFAIPYLLNLLAALALGALIGAERQWRQRMAGLRTNALVAIGATVFILSSVSASPDSPGRIAAQIVSGIGFLGAGVIMREGMNIRGLNTAATLWCSAGIGVLCGLGEFTIAATATLVILCANILLREAALRINAQPKSQATDLVQNYKIRVTCHEKDEILVRTVILQALNGLHVRLKSLSSADIQQGLLEVCAEVEATPAEQKEVEGIVCRVSLEKSVSAVNWIISSEQPV

Flanking regions ( +/- flanking 50bp)

TTTTCTGTTTGAACACCTGACGTCATTACGTCATACAGGTGGAGGTTACTATGTTTGCAATTCCTTATTTACTGAATTTACTTGCCGCACTTGCACTCGGTGCATTAATTGGTGCAGAACGCCAGTGGCGTCAGCGCATGGCCGGGCTGCGGACCAATGCTCTGGTCGCAATTGGCGCCACTGTTTTTATTTTAAGCTCTGTCAGTGCCTCACCGGACAGCCCCGGCAGGATCGCGGCGCAAATTGTCTCCGGTATCGGGTTTTTAGGTGCCGGCGTCATTATGCGTGAAGGTATGAATATCCGCGGATTAAACACGGCGGCGACATTGTGGTGTTCCGCAGGGATTGGTGTGTTGTGCGGATTAGGAGAGTTCACTATTGCCGCGACAGCCACGCTGGTTATTTTATGCGCGAATATTTTGTTGCGGGAGGCTGCTCTGAGAATTAATGCACAGCCAAAAAGCCAGGCTACAGACCTGGTGCAGAACTATAAAATTCGTGTTACCTGTCATGAAAAAGATGAAATTTTAGTCCGTACTGTCATTTTACAGGCTCTGAATGGGTTACATGTCCGTCTTAAATCACTCAGTAGTGCGGACATTCAACAGGGATTACTGGAGGTCTGTGCTGAAGTTGAGGCTACACCGGCAGAGCAAAAAGAGGTGGAAGGCATCGTTTGCCGCGTCAGTCTGGAGAAAAGTGTCAGTGCAGTGAACTGGATTATTTCATCAGAGCAACCTGTCTGATATTTTCGCAGGGGATTGGTGGCGGTCATTACGGCTGTCACCAATTAAAA