Homologs in group_454

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_00610 FBDBKF_00610 89.8 Morganella morganii S1 fliJ flagellar export protein FliJ
EHELCC_00935 EHELCC_00935 89.8 Morganella morganii S2 fliJ flagellar export protein FliJ
NLDBIP_02525 NLDBIP_02525 89.8 Morganella morganii S4 fliJ flagellar export protein FliJ
LHKJJB_04040 LHKJJB_04040 89.8 Morganella morganii S3 fliJ flagellar export protein FliJ
HKOGLL_03005 HKOGLL_03005 89.8 Morganella morganii S5 fliJ flagellar export protein FliJ
PMI_RS07980 PMI_RS07980 56.5 Proteus mirabilis HI4320 fliJ flagellar export protein FliJ

Distribution of the homologs in the orthogroup group_454

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_454

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0A1K1 1.94e-34 120 44 0 143 1 fliJ Flagellar FliJ protein Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A1K2 1.94e-34 120 44 0 143 3 fliJ Flagellar FliJ protein Salmonella typhi
P52613 5.07e-33 116 44 0 143 1 fliJ Flagellar FliJ protein Escherichia coli (strain K12)
P57179 0.00024 42 37 0 45 3 fliJ Flagellar FliJ protein Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS06620
Feature type CDS
Gene fliJ
Product flagellar export protein FliJ
Location 1378860 - 1379303 (strand: 1)
Length 444 (nucleotides) / 147 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_454
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF02050 Flagellar FliJ protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2882 Cell motility (N) N Flagellar biosynthesis chaperone FliJ

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K02413 flagellar protein FliJ Flagellar assembly -

Protein Sequence

MSKNNALTTLLNLAEDAAEEAAKVLAQVRMTHTQMSQQLTMLENYQADYRQKLNQTLHTGMAADKWQNYQQFLVTLDVTIEQQQTQLTVWAHRVSEANRHWQEKQQRVNAFDTLIQRADHAHNQRQNRLEQKQMDEFAQRATLWRTR

Flanking regions ( +/- flanking 50bp)

GCCTGTGAGCAGCTTGATCAGGTGGTGCCGCAAGCGTAACGAGGCCGTCAATGTCAAAAAATAATGCATTAACCACACTGTTAAATTTAGCCGAAGATGCCGCCGAAGAGGCGGCAAAAGTGTTGGCTCAGGTGCGCATGACTCACACGCAGATGAGTCAGCAGCTCACTATGCTGGAAAATTATCAGGCAGATTACCGCCAGAAACTGAATCAGACGCTTCACACCGGAATGGCCGCCGATAAGTGGCAGAATTATCAGCAATTTTTAGTCACACTCGATGTGACAATAGAACAGCAGCAAACCCAGTTAACCGTCTGGGCACACCGGGTCAGTGAGGCAAACCGCCACTGGCAGGAAAAACAGCAGCGGGTAAATGCGTTCGATACTCTTATTCAGCGCGCCGATCATGCACATAATCAACGACAGAACCGGCTGGAGCAAAAGCAGATGGATGAATTTGCCCAGCGGGCTACTTTATGGAGAACCCGATAAATGGATGTCAATGCCGGCACCAAACCGATCAGTTCAGCTGACAATGCATT