COG2882


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG2882, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Flagellar biosynthesis chaperone FliJ
Function(s) descr. Cell motility (N)

Occurence in the database

COG2882 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_454 FBDBKF_00610 101943 102386 1 fliJ flagellar export protein FliJ Morganella morganii S1
1 group_454 EHELCC_00935 206482 206925 -1 fliJ flagellar export protein FliJ Morganella morganii S2
2 group_454 NLDBIP_02525 473211 473654 1 fliJ flagellar export protein FliJ Morganella morganii S4
3 group_454 LHKJJB_04040 80452 80895 1 fliJ flagellar export protein FliJ Morganella morganii S3
4 group_454 HKOGLL_03005 206687 207130 -1 fliJ flagellar export protein FliJ Morganella morganii S5
5 group_454 F4V73_RS06620 1378860 1379303 1 fliJ flagellar export protein FliJ Morganella psychrotolerans
6 group_454 PMI_RS07980 1748087 1748533 1 fliJ flagellar export protein FliJ Proteus mirabilis HI4320