Homologs in group_4045

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4045

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4045

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P18679 6.52e-14 63 40 0 66 4 cro-HTT 8.4 kDa cro protein Escherichia phage HK022

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS06240
Feature type CDS
Gene -
Product transcriptional regulator
Location 1306554 - 1306781 (strand: -1)
Length 228 (nucleotides) / 75 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_4045
Orthogroup size 1
N. genomes 1

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Genomic region

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3311 Transcription (K)
Mobilome: prophages, transposons (X)		 KX DNA-binding transcriptional regulator AlpA

Protein Sequence

MESIRTPITDIGVVNVAKACGVSERAVYKWINNGFLPKTEFFGKTNYAEIIQSISNGKYKASDLLTLSQQKLLAA

Flanking regions ( +/- flanking 50bp)

TTTCAGTACAGAGATAATGTGTACTTAAAGTACGACAATGGAGATCGCATATGGAAAGTATACGCACACCAATTACAGATATTGGGGTTGTCAATGTAGCAAAGGCATGCGGAGTAAGTGAGCGAGCAGTGTACAAATGGATTAACAACGGATTCCTGCCAAAGACTGAATTCTTTGGGAAAACGAACTACGCAGAAATCATCCAGTCCATTTCAAATGGTAAGTACAAAGCGAGCGATCTGCTTACTCTTAGTCAACAAAAACTACTTGCAGCATAACAAACCACCGCTCTTTCAAAATTTAGCCCGTTCCGGATATGCGCTGGAAC