Homologs in group_2874

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_11275 FBDBKF_11275 71.2 Morganella morganii S1 - DNA-binding protein
EHELCC_17940 EHELCC_17940 71.2 Morganella morganii S2 - DNA-binding protein
NLDBIP_05270 NLDBIP_05270 71.2 Morganella morganii S4 - DNA-binding protein
LHKJJB_02150 LHKJJB_02150 71.2 Morganella morganii S3 - DNA-binding protein
HKOGLL_15530 HKOGLL_15530 71.2 Morganella morganii S5 - DNA-binding protein

Distribution of the homologs in the orthogroup group_2874

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2874

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS06215
Feature type CDS
Gene -
Product hypothetical protein
Location 1303880 - 1304086 (strand: -1)
Length 207 (nucleotides) / 68 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2874
Orthogroup size 6
N. genomes 6

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Genomic region

Protein Sequence

MEPTEFEKWCAGELGYSPEYIMTQRKENIFGGTEYKHGEIGIRYRAYTAGVISMLPYQTPALPQPPEE

Flanking regions ( +/- flanking 50bp)

CAGCAGATGATTTTAATCAGTTCAGAGCGATTAACTGAGGACTTTTGATTATGGAACCAACGGAGTTTGAAAAGTGGTGTGCGGGTGAGCTTGGCTATTCGCCTGAGTACATCATGACGCAGCGGAAAGAGAATATTTTCGGTGGCACCGAATACAAGCATGGTGAGATTGGCATCAGATACCGCGCTTATACCGCGGGCGTAATAAGCATGCTGCCATATCAGACACCGGCACTACCACAACCACCGGAGGAGTGATGAAATGACAGAGAAAACACAGAAGCTAAAGCCATGCCCGTTTTGCGGAT