Homologs in group_3832

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1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
PMI_RS09790 PMI_RS09790 63.1 Proteus mirabilis HI4320 - M15 family metallopeptidase

Distribution of the homologs in the orthogroup group_3832

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3832

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q6QGP7 5.3e-27 100 42 5 135 1 lys L-alanyl-D-glutamate peptidase Escherichia phage T5
Q37976 2.92e-05 45 27 5 134 2 ply L-alanyl-D-glutamate peptidase Listeria phage A118

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS06170
Feature type CDS
Gene -
Product M15 family metallopeptidase
Location 1300051 - 1300449 (strand: -1)
Length 399 (nucleotides) / 132 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3832
Orthogroup size 2
N. genomes 2

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Genomic region

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3108 Function unknown (S) S Uncharacterized conserved protein YcbK, DUF882 family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K17733 peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-] - -

Protein Sequence

MIMSSFRFSKRSEDNLKGVNPDLVKVIRRALEITPVDFIVIEGLRTQARQKELVAAGKSQTNNSRHLTGHAVDIIPVNTKWQIEEFKPLLKAVKQAADELGVKLRFGINWKNDPSLPIETRFIDAPHIEIPA

Flanking regions ( +/- flanking 50bp)

GTCAGGTGCTGAGTTCATTAAGGCGCTTGAGAAACGGATAAAAAGGAAAATTGATAATGAGTAGCTTCAGATTCAGTAAGCGCAGTGAAGATAACCTGAAAGGCGTCAATCCTGACTTGGTGAAAGTTATCCGCCGCGCGCTGGAGATTACACCGGTGGATTTCATTGTTATTGAAGGTCTGCGCACACAAGCTCGCCAAAAAGAATTGGTCGCAGCTGGTAAATCACAAACAAATAACAGCCGACATCTGACCGGCCATGCAGTAGACATTATTCCGGTTAACACCAAGTGGCAGATTGAAGAATTCAAGCCGTTGCTGAAAGCAGTTAAACAGGCTGCTGATGAACTTGGCGTGAAGTTGCGGTTCGGTATCAACTGGAAGAATGACCCGTCATTGCCGATTGAGACACGGTTCATTGATGCGCCTCATATCGAAATACCGGCATGAGTACCGCGACAAAGATATGGCTCGGTATTTGCGGAACACTGGCTATCGGC