Homologs in group_3831
1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.
| Locus tag | Identity | Source | Gene | Product | |
|---|---|---|---|---|---|
| PMI_RS04010 | PMI_RS04010 | 49.2 | Proteus mirabilis HI4320 | - | type II toxin-antitoxin system HicB family antitoxin |
Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).
| Swissprot accession | Eval | Score | ID (%) | N gaps | Alignment length | Annot score | Gene | Description | Organism |
|---|---|---|---|---|---|---|---|---|---|
| P51716 | 5.09e-51 | 161 | 52 | 0 | 132 | 4 | None | Uncharacterized 14.9 kDa protein in rep-hol intergenic region | Haemophilus phage HP1 (strain HP1c1) |
| Q9HK40 | 5.41e-07 | 47 | 43 | 1 | 58 | 3 | Ta0767 | UPF0150 protein Ta0767 | Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165) |
| Q7MZD8 | 2.05e-05 | 44 | 29 | 1 | 92 | 3 | hicB2 | Antitoxin HicB 2 | Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01) |
| P72913 | 5.17e-05 | 42 | 35 | 1 | 57 | 3 | ssr1765 | UPF0150 protein ssr1765 | Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa) |
| O29190 | 0.000244 | 40 | 37 | 2 | 59 | 3 | AF_1072 | UPF0150 protein AF_1072 | Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16) |
| Q7N1I3 | 0.00065 | 40 | 36 | 1 | 58 | 3 | hicB1 | Antitoxin HicB 1 | Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01) |
| Source | Morganella psychrotolerans |
|---|---|
| Locus tag | F4V73_RS06015 |
| Feature type | CDS |
| Gene | - |
| Product | type II toxin-antitoxin system HicB family antitoxin |
| Location | 1276444 - 1276854 (strand: 1) |
| Length | 411 (nucleotides) / 136 (amino acids) |
| Accession | term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object |
|---|---|
| Length | 2012992 nucleotides |
| Topology | linear |
| Plasmid | False |
| Orthogroup | group_3831 | |
|---|---|---|
| Orthogroup size | 2 | |
| N. genomes | 2 |
| PF15919 | HicB_like antitoxin of bacterial toxin-antitoxin system |
|---|
| ID | Function(s) descr. | Function(s) cat. | Description |
|---|---|---|---|
| COG1598 | Defense mechanisms (V) | V | Antitoxin component HicB of the HicAB toxin-antitoxin system |
| KO | Description | Pathways | Modules |
|---|---|---|---|
| K18843 | antitoxin HicB | - | - |
MLYPVAIDKSDSSFGVRVPDIPGCFSGGDDYQDAIESAHEAIEAHIELLVEDGEAIPEVTSIEKWVNDPEYAGAVWALVDVDITRLMGKAEKINVTLPSLLIRRIDQFVAQHPEYGSRSGFLAQVAADKVIATERR
AAGCATCAAAAAACAGGCGGGGCTTTAAGCCCCTCCTACCGGAGGTTTTAATGTTATATCCCGTTGCTATTGATAAAAGCGATTCATCTTTCGGCGTTCGTGTCCCTGATATTCCGGGCTGCTTTTCTGGTGGTGATGATTATCAGGATGCGATTGAAAGCGCACATGAAGCTATAGAGGCGCATATTGAGTTACTTGTCGAAGATGGCGAGGCTATTCCGGAAGTAACCAGTATCGAAAAGTGGGTTAACGACCCGGAGTATGCCGGTGCGGTTTGGGCGCTGGTTGATGTCGATATTACCCGACTGATGGGGAAAGCGGAGAAGATAAATGTAACTCTGCCCTCACTGCTGATCCGCCGTATCGATCAGTTTGTCGCTCAGCATCCCGAATACGGTAGCCGCTCCGGCTTTCTTGCCCAGGTAGCGGCGGATAAGGTTATTGCGACAGAGAGAAGGTAAATACGGATGTATGCCCCTTGACTGCGGTGTGGTTGAGGGGTTTTGAAGCG
