Homologs in group_921

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_05000 FBDBKF_05000 82.4 Morganella morganii S1 - DUF945 domain-containing protein
EHELCC_12590 EHELCC_12590 82.4 Morganella morganii S2 - DUF945 domain-containing protein
NLDBIP_12930 NLDBIP_12930 82.4 Morganella morganii S4 - DUF945 domain-containing protein
LHKJJB_12790 LHKJJB_12790 82.4 Morganella morganii S3 - DUF945 domain-containing protein
HKOGLL_11405 HKOGLL_11405 82.4 Morganella morganii S5 - DUF945 domain-containing protein
PMI_RS06260 PMI_RS06260 30.6 Proteus mirabilis HI4320 - YdgA family protein

Distribution of the homologs in the orthogroup group_921

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_921

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P77804 3.8e-66 225 31 14 497 1 ydgA Protein YdgA Escherichia coli (strain K12)
P32128 6.35e-29 122 22 12 494 3 yihF Uncharacterized protein YihF Escherichia coli (strain K12)
P44132 5.44e-08 58 27 4 188 4 HI_1236 Uncharacterized protein HI_1236 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS05445
Feature type CDS
Gene -
Product YdgA family protein
Location 1157393 - 1158970 (strand: 1)
Length 1578 (nucleotides) / 525 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_921
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF06097 Bacterial protein of unknown function (DUF945)

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG5339 Function unknown (S) S Uncharacterized conserved protein YdgA, DUF945 family

Protein Sequence

MKKSLVAVGVIVALGAAWGVASWQTGKTIEANLEQYVAKANKLIKDKYPDAQITLTAKDFSRGIFSSDVKLVLQGEGSSAKDQLVIVNKIDHGPFPLSQLKKMVLSPNMASIHSELESSESTKPAFDMTGGKSPVALDTRISYDQNFDIDLAVSKIDYKKDGEELAFSGADLNVKFDKEFKNVKGNGSSNELTYRKGERESLVMRGLAFDSDVSKSGDSFFYLGDQNLSMKELVVVNYSDNVTLKDLKLNGTSGVKDNKMSADIDYSLGSLSYRDIDLGGITLKGALKDLDATAANTLMASMEEYSQMSDSMYTENFDDSKMDALDEKMKTNALALFKHSPSFAISPLSWKNSGGESKVNFSMTFNPLTQENFKSLEHSGSFEKILPVLVKDFAFNMDLSKPMLTDFVAVAMQSQGMGAKEAKEQGEQGVAQMASMGAMMEVVKVTDKTIGMDLKYSNNNIDFNGKKFTVAEFLAKYDQYGMLSDNSDEGYNEEPVEMNADGDVIEENITIGEEPAADTAAPAAQ

Flanking regions ( +/- flanking 50bp)

ACCGTGCGAAAACCTGCAAATTGAATCGCATATAAAGGATGGATTTCTCTATGAAAAAGTCGTTAGTTGCTGTTGGCGTTATTGTTGCATTAGGTGCAGCATGGGGTGTTGCTTCATGGCAGACCGGTAAAACAATCGAAGCGAACCTCGAGCAGTACGTTGCCAAAGCAAATAAACTGATCAAGGATAAATATCCTGATGCTCAGATTACTCTGACTGCAAAAGATTTTTCACGCGGTATTTTCAGTTCTGACGTTAAACTGGTTCTTCAGGGTGAAGGAAGCAGCGCCAAAGACCAGTTAGTTATCGTTAACAAAATTGACCACGGTCCGTTCCCGCTGTCTCAGCTGAAAAAAATGGTTCTTTCGCCAAACATGGCGTCAATCCATTCTGAACTGGAAAGCAGCGAAAGCACCAAACCGGCATTTGATATGACCGGCGGTAAATCCCCTGTTGCTCTGGACACCCGTATCAGTTACGACCAGAATTTTGATATCGACCTTGCTGTCAGCAAAATCGACTACAAAAAAGATGGCGAAGAACTGGCATTCTCCGGTGCAGACCTGAATGTTAAATTCGATAAAGAATTTAAAAACGTGAAAGGTAACGGCAGCAGCAATGAACTGACTTACCGCAAAGGTGAGCGTGAAAGCCTGGTGATGCGTGGTCTGGCATTTGACAGCGACGTAAGCAAATCCGGTGACAGCTTCTTCTATCTGGGCGACCAGAATCTGTCGATGAAAGAGTTGGTTGTTGTTAATTACAGCGATAACGTTACATTGAAAGATCTGAAGCTGAACGGCACGTCCGGCGTCAAAGACAACAAAATGAGCGCGGATATCGATTACAGCCTGGGTTCACTGAGCTATCGTGATATCGACCTGGGTGGCATCACCCTGAAAGGCGCACTGAAAGATCTGGATGCAACTGCAGCAAATACATTGATGGCATCAATGGAAGAATACTCTCAGATGAGTGATTCCATGTATACCGAAAACTTTGATGACAGCAAAATGGACGCGCTGGACGAGAAAATGAAGACCAACGCACTGGCGCTCTTCAAACACAGTCCGTCATTTGCTATCTCCCCGCTGAGCTGGAAAAACAGCGGTGGCGAGTCAAAAGTTAACTTCAGCATGACCTTTAATCCCCTGACTCAGGAAAACTTTAAATCCCTGGAGCACAGTGGCAGCTTTGAAAAAATCCTGCCGGTTCTGGTTAAAGATTTCGCATTCAATATGGATCTGTCAAAACCAATGCTGACTGATTTCGTGGCGGTTGCCATGCAGTCACAAGGTATGGGCGCGAAAGAAGCCAAAGAACAAGGCGAACAAGGTGTTGCTCAGATGGCCAGCATGGGTGCCATGATGGAAGTGGTTAAAGTTACTGATAAAACCATCGGCATGGATCTGAAATACAGCAATAACAACATTGATTTCAACGGTAAGAAATTTACTGTTGCTGAATTCCTCGCAAAATACGACCAATACGGTATGTTGAGTGATAACAGTGACGAAGGCTATAACGAAGAGCCTGTCGAAATGAATGCTGACGGCGACGTCATTGAAGAAAATATTACTATCGGTGAAGAGCCGGCTGCAGACACTGCGGCACCGGCTGCGCAGTAATATCGTTCTTTATCATTAGTTGATTAAGTGAAAGCCGGTCGCCAGACCGG