Homologs in group_2579

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_02840 FBDBKF_02840 84.2 Morganella morganii S1 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component
EHELCC_03310 EHELCC_03310 84.2 Morganella morganii S2 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component
NLDBIP_00150 NLDBIP_00150 84.2 Morganella morganii S4 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component
LHKJJB_01885 LHKJJB_01885 84.2 Morganella morganii S3 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component
HKOGLL_01925 HKOGLL_01925 84.2 Morganella morganii S5 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component

Distribution of the homologs in the orthogroup group_2579

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2579

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
O34805 1.92e-10 64 27 12 300 3 yvrC Uncharacterized ABC transporter substrate-binding lipoprotein YvrC Bacillus subtilis (strain 168)
Q66EE7 1.03e-06 52 23 10 211 3 btuF Vitamin B12-binding protein Yersinia pseudotuberculosis serotype I (strain IP32953)
B2K552 1.03e-06 52 23 10 211 3 btuF Vitamin B12-binding protein Yersinia pseudotuberculosis serotype IB (strain PB1/+)
A7FM05 1.03e-06 52 23 10 211 3 btuF Vitamin B12-binding protein Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
A4TPX1 1.07e-06 52 23 10 211 3 btuF Vitamin B12-binding protein Yersinia pestis (strain Pestoides F)
Q1CLU2 1.07e-06 52 23 10 211 3 btuF Vitamin B12-binding protein Yersinia pestis bv. Antiqua (strain Nepal516)
A9R1E1 1.07e-06 52 23 10 211 3 btuF Vitamin B12-binding protein Yersinia pestis bv. Antiqua (strain Angola)
Q8ZBM3 1.07e-06 52 23 10 211 3 btuF Vitamin B12-binding protein Yersinia pestis
Q1C3X6 1.07e-06 52 23 10 211 3 btuF Vitamin B12-binding protein Yersinia pestis bv. Antiqua (strain Antiqua)
B1JK18 1.36e-06 52 23 10 211 3 btuF Vitamin B12-binding protein Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
Q7N842 6.05e-06 50 23 10 213 3 btuF Vitamin B12-binding protein Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)
Q7MNT2 0.000238 45 21 13 261 3 btuF Vitamin B12-binding protein Vibrio vulnificus (strain YJ016)
Q8DEM7 0.000702 44 21 13 261 3 btuF Vitamin B12-binding protein Vibrio vulnificus (strain CMCP6)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS05280
Feature type CDS
Gene -
Product ABC transporter substrate-binding protein
Location 1122691 - 1123644 (strand: -1)
Length 954 (nucleotides) / 317 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2579
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF01497 Periplasmic binding protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0614 Inorganic ion transport and metabolism (P) P ABC-type Fe3+-hydroxamate transport system, periplasmic component

Protein Sequence

MMKKLLLSTFIISALFSLPAHTALAPVQFDANLDGSEYHFKLDKHPQRIVSLSQITTEMLLVLGLGDRMVGTAFLEEPIYPPVKEAYDKIPVLAEKWPSYEVFMSVSPDFSTGWANSYSKLALEANKIVPEGVSVYIPESMTSSDADVNTYFNDLLKFGEIFGVEDNAHKYVASEKEKLKSVVSHINKYPEKTAFIFDSQDGKPYTFFEGYTTEMLKLISVKNIFAGKGIKKTWAVGNWEDVIMSDPQVIIIPVYKGFRNDDDYDQKVAFLESMPEMQGVSAIKNKNYIKVNLSELVPGPRSIDILPALAKEIHEKH

Flanking regions ( +/- flanking 50bp)

GTGTGGCTATATTTCTCTGAATTAGTTTGTGTTTGTAACCCGGAGAGGGAATGATGAAAAAATTATTACTGAGTACATTTATTATCTCTGCACTATTTTCACTACCGGCGCACACTGCACTGGCACCGGTTCAGTTTGATGCAAATCTGGACGGCAGTGAATATCATTTTAAACTGGATAAACACCCGCAGCGTATTGTTTCCCTCAGCCAGATCACCACGGAGATGTTATTGGTACTGGGATTAGGTGACCGTATGGTGGGAACCGCCTTTCTGGAAGAGCCTATTTATCCGCCGGTCAAAGAAGCGTATGACAAAATCCCGGTGCTGGCAGAAAAATGGCCCTCTTATGAAGTGTTTATGTCAGTTTCCCCTGATTTTTCCACCGGCTGGGCAAATTCATATTCTAAATTAGCACTGGAAGCGAATAAAATTGTTCCGGAAGGCGTTTCTGTTTATATCCCCGAATCAATGACCTCTTCAGACGCGGATGTGAATACCTATTTTAATGATCTGCTGAAGTTTGGTGAGATTTTTGGCGTTGAAGACAATGCTCATAAATATGTTGCGTCTGAAAAAGAAAAATTAAAATCAGTCGTCAGCCATATTAATAAATACCCTGAGAAAACCGCGTTTATTTTTGATTCACAGGATGGTAAGCCTTATACTTTTTTTGAGGGGTATACGACGGAAATGCTTAAATTAATTTCAGTGAAAAATATTTTCGCCGGGAAAGGCATTAAAAAGACCTGGGCTGTCGGTAACTGGGAAGATGTGATTATGTCTGATCCACAAGTCATTATTATACCTGTCTATAAAGGCTTCCGTAATGATGATGATTATGACCAGAAAGTAGCGTTTCTTGAATCTATGCCGGAAATGCAGGGCGTCAGTGCGATAAAAAATAAAAATTATATAAAAGTGAATTTATCTGAGCTTGTTCCGGGTCCCCGTTCTATTGATATTCTGCCGGCACTGGCAAAAGAAATACACGAGAAACATTAATCGTGTATTTGTTCAGCACCGGTTTTTATCCGGTGCTGAAGTATGACGAG