Homologs in group_15

Help

18 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_02695 FBDBKF_02695 93.4 Morganella morganii S1 sdaC Amino acid permease
FBDBKF_08400 FBDBKF_08400 51.5 Morganella morganii S1 sdaC Amino acid permease
FBDBKF_10620 FBDBKF_10620 65.8 Morganella morganii S1 sdaC Amino acid permease
EHELCC_03165 EHELCC_03165 93.4 Morganella morganii S2 sdaC Amino acid permease
EHELCC_13125 EHELCC_13125 51.5 Morganella morganii S2 sdaC Amino acid permease
EHELCC_14955 EHELCC_14955 65.8 Morganella morganii S2 sdaC Amino acid permease
NLDBIP_00295 NLDBIP_00295 93.4 Morganella morganii S4 sdaC Amino acid permease
NLDBIP_13465 NLDBIP_13465 51.5 Morganella morganii S4 sdaC Amino acid permease
NLDBIP_14785 NLDBIP_14785 65.8 Morganella morganii S4 sdaC Amino acid permease
LHKJJB_01740 LHKJJB_01740 93.4 Morganella morganii S3 sdaC Amino acid permease
LHKJJB_13090 LHKJJB_13090 51.5 Morganella morganii S3 sdaC Amino acid permease
LHKJJB_14560 LHKJJB_14560 65.8 Morganella morganii S3 sdaC Amino acid permease
HKOGLL_01780 HKOGLL_01780 93.4 Morganella morganii S5 sdaC Amino acid permease
HKOGLL_11940 HKOGLL_11940 51.5 Morganella morganii S5 sdaC Amino acid permease
HKOGLL_13180 HKOGLL_13180 65.8 Morganella morganii S5 sdaC Amino acid permease
F4V73_RS09600 F4V73_RS09600 51.1 Morganella psychrotolerans - amino acid permease
F4V73_RS14330 F4V73_RS14330 64.9 Morganella psychrotolerans - aromatic amino acid transport family protein
PMI_RS13530 PMI_RS13530 49.4 Proteus mirabilis HI4320 - amino acid permease

Distribution of the homologs in the orthogroup group_15

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_15

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P37660 0.0 513 60 1 412 1 yhjV Inner membrane transport protein YhjV Escherichia coli (strain K12)
P42628 7.29e-153 443 52 2 420 1 dlsT Probable serine transporter Escherichia coli (strain K12)
Q8XAF5 3.18e-152 441 52 2 420 1 dlsT Serine transporter Escherichia coli O157:H7
P44615 7.8e-36 139 25 5 393 3 sdaC Serine transporter SdaC Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P0AAD6 1.93e-33 133 26 9 433 1 sdaC Serine transporter SdaC Escherichia coli (strain K12)
P0AAD7 1.93e-33 133 26 9 433 3 sdaC Serine transporter SdaC Escherichia coli O157:H7
Q83QD0 3.49e-30 124 25 9 433 3 sdaC Serine transporter SdaC Shigella flexneri
B7LQI2 1.23e-24 108 24 11 413 3 tdcC Threonine/serine transporter TdcC Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
A9MPR1 3.55e-24 107 25 13 448 3 tdcC Threonine/serine transporter TdcC Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
B4T6B2 4.14e-24 107 25 13 451 3 tdcC Threonine/serine transporter TdcC Salmonella newport (strain SL254)
A9N628 4.97e-24 107 25 12 448 3 tdcC Threonine/serine transporter TdcC Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
Q8ZLW1 5.21e-24 107 25 12 448 3 tdcC Threonine/serine transporter TdcC Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
B4TVX7 5.21e-24 107 25 12 448 3 tdcC Threonine/serine transporter TdcC Salmonella schwarzengrund (strain CVM19633)
B5BGF7 5.21e-24 107 25 12 448 3 tdcC Threonine/serine transporter TdcC Salmonella paratyphi A (strain AKU_12601)
C0PZ16 5.21e-24 107 25 12 448 3 tdcC Threonine/serine transporter TdcC Salmonella paratyphi C (strain RKS4594)
Q5PCA8 5.21e-24 107 25 12 448 3 tdcC Threonine/serine transporter TdcC Salmonella paratyphi A (strain ATCC 9150 / SARB42)
B4TIX1 5.21e-24 107 25 12 448 3 tdcC Threonine/serine transporter TdcC Salmonella heidelberg (strain SL476)
B5REJ9 5.21e-24 107 25 12 448 3 tdcC Threonine/serine transporter TdcC Salmonella gallinarum (strain 287/91 / NCTC 13346)
B5QZS1 5.21e-24 107 25 12 448 3 tdcC Threonine/serine transporter TdcC Salmonella enteritidis PT4 (strain P125109)
B5FHX7 5.21e-24 107 25 12 448 3 tdcC Threonine/serine transporter TdcC Salmonella dublin (strain CT_02021853)
Q57JL7 5.21e-24 107 25 12 448 3 tdcC Threonine/serine transporter TdcC Salmonella choleraesuis (strain SC-B67)
B5F6Q0 5.21e-24 107 25 12 448 3 tdcC Threonine/serine transporter TdcC Salmonella agona (strain SL483)
A6TAU9 5.52e-24 106 24 13 450 3 tdcC Threonine/serine transporter TdcC Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
B5XVZ7 5.52e-24 106 24 13 450 3 tdcC Threonine/serine transporter TdcC Klebsiella pneumoniae (strain 342)
A8AQ08 7.08e-24 106 25 13 447 3 tdcC Threonine/serine transporter TdcC Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
D0ZE09 1.33e-23 105 25 10 444 3 tdcC Threonine/serine transporter TdcC Edwardsiella tarda (strain EIB202)
Q4G4A7 2e-23 105 25 10 444 3 tdcC Threonine/serine transporter TdcC Edwardsiella tarda
Q3YXB3 1.05e-22 103 24 15 455 3 tdcC Threonine/serine transporter TdcC Shigella sonnei (strain Ss046)
P0AAD8 1.05e-22 103 24 15 455 1 tdcC Threonine/serine transporter TdcC Escherichia coli (strain K12)
A8A4S9 1.05e-22 103 24 15 455 3 tdcC Threonine/serine transporter TdcC Escherichia coli O9:H4 (strain HS)
B1XGT1 1.05e-22 103 24 15 455 3 tdcC Threonine/serine transporter TdcC Escherichia coli (strain K12 / DH10B)
C4ZR30 1.05e-22 103 24 15 455 3 tdcC Threonine/serine transporter TdcC Escherichia coli (strain K12 / MC4100 / BW2952)
B7NJY3 1.05e-22 103 24 15 455 3 tdcC Threonine/serine transporter TdcC Escherichia coli O7:K1 (strain IAI39 / ExPEC)
B5YS06 1.05e-22 103 24 15 455 3 tdcC Threonine/serine transporter TdcC Escherichia coli O157:H7 (strain EC4115 / EHEC)
P0AAD9 1.05e-22 103 24 15 455 3 tdcC Threonine/serine transporter TdcC Escherichia coli O157:H7
A7ZS06 1.05e-22 103 24 15 455 3 tdcC Threonine/serine transporter TdcC Escherichia coli O139:H28 (strain E24377A / ETEC)
Q83Q28 1.59e-22 102 24 15 455 3 tdcC Threonine/serine transporter TdcC Shigella flexneri
Q0T0F2 1.59e-22 102 24 15 455 3 tdcC Threonine/serine transporter TdcC Shigella flexneri serotype 5b (strain 8401)
B1LFL8 1.59e-22 102 24 15 455 3 tdcC Threonine/serine transporter TdcC Escherichia coli (strain SMS-3-5 / SECEC)
B7NDA4 1.59e-22 102 24 15 455 3 tdcC Threonine/serine transporter TdcC Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
B1IRJ9 1.59e-22 102 24 15 455 3 tdcC Threonine/serine transporter TdcC Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
Q31WR5 2.06e-22 102 23 15 455 3 tdcC Threonine/serine transporter TdcC Shigella boydii serotype 4 (strain Sb227)
B2U0A0 2.06e-22 102 23 15 455 3 tdcC Threonine/serine transporter TdcC Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
Q1R6L7 2.06e-22 102 23 15 455 3 tdcC Threonine/serine transporter TdcC Escherichia coli (strain UTI89 / UPEC)
B6I491 2.06e-22 102 23 15 455 3 tdcC Threonine/serine transporter TdcC Escherichia coli (strain SE11)
Q8FDC3 2.06e-22 102 23 15 455 3 tdcC Threonine/serine transporter TdcC Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TCY8 2.06e-22 102 23 15 455 3 tdcC Threonine/serine transporter TdcC Escherichia coli O6:K15:H31 (strain 536 / UPEC)
A1AG28 2.06e-22 102 23 15 455 3 tdcC Threonine/serine transporter TdcC Escherichia coli O1:K1 / APEC
B7M023 2.06e-22 102 23 15 455 3 tdcC Threonine/serine transporter TdcC Escherichia coli O8 (strain IAI1)
B7N0B7 2.06e-22 102 23 15 455 3 tdcC Threonine/serine transporter TdcC Escherichia coli O81 (strain ED1a)
B7LH53 2.06e-22 102 23 15 455 3 tdcC Threonine/serine transporter TdcC Escherichia coli (strain 55989 / EAEC)
B7UJ20 2.06e-22 102 23 15 455 3 tdcC Threonine/serine transporter TdcC Escherichia coli O127:H6 (strain E2348/69 / EPEC)
Q32BK1 2.2e-22 102 24 15 455 3 tdcC Threonine/serine transporter TdcC Shigella dysenteriae serotype 1 (strain Sd197)
B7MB46 2.26e-22 102 24 15 455 3 tdcC Threonine/serine transporter TdcC Escherichia coli O45:K1 (strain S88 / ExPEC)
A1JIM8 6.92e-22 100 22 11 448 3 tdcC Threonine/serine transporter TdcC Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
A4WEU1 1.79e-21 99 23 10 447 3 tdcC Threonine/serine transporter TdcC Enterobacter sp. (strain 638)
P63340 6.38e-18 88 22 10 417 1 yqeG Inner membrane transport protein YqeG Escherichia coli (strain K12)
P63341 6.38e-18 88 22 10 417 3 yqeG Inner membrane transport protein YqeG Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P63342 6.38e-18 88 22 10 417 3 yqeG Inner membrane transport protein YqeG Escherichia coli O157:H7

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS05190
Feature type CDS
Gene -
Product amino acid permease
Location 1104953 - 1106227 (strand: 1)
Length 1275 (nucleotides) / 424 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_15
Orthogroup size 19
N. genomes 7

Actions

Genomic region

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0814 Amino acid transport and metabolism (E) E Amino acid permease

Protein Sequence

MQTDANSQSDLRKIPFTKYDTGWVILCIGMAIGSGIVFMPVQVGIKGIWVFIAATLLSYPAIYWLQNLYLRTLSESDECEDYASVITQYLGKNWGVALGIAYFLMLLHGMFSYSLAVTFDSASYIKTFGLSEGLWSDSVWYGLIILTVLVVIAAQGERLLFKISGPMVIVKFGIIVLLGVVMVPYWNFANITAFPDILPFLRDVFLTLPFTLFSILFVQILSPMNIAYRRVEKDKRIATYRAIRANRVAYIILAVAVLFFAFSFTFSISHEQAVSAFEQNISALAIAAQVIPGSVVKVMTAMLNIFAILTAFLGIYLGFQEAIKGIVVNVLSRFMPQERINHTVLHYSVCAGVILALWFWVSTRFSILFFMQLGGPLFGIVSCLIPCYLVYRVPVLHKYKGATVWFIIFFGVLLCLSPFFKFFE

Flanking regions ( +/- flanking 50bp)

TTGTTCCTGACTTTTTTAATAATTAAATCTATAACGTTGAGGAATTGACTATGCAGACAGATGCAAACTCACAAAGCGATTTACGAAAGATTCCGTTTACCAAATATGATACCGGCTGGGTTATTTTATGTATCGGTATGGCAATTGGTTCCGGCATTGTGTTTATGCCGGTTCAGGTTGGCATTAAAGGTATCTGGGTCTTTATTGCGGCAACCTTACTCTCTTATCCGGCGATTTACTGGCTGCAAAACTTATATCTGCGCACATTATCCGAATCAGATGAGTGTGAAGATTATGCCAGCGTAATTACCCAATATCTGGGGAAAAACTGGGGAGTAGCGCTCGGGATAGCTTATTTCCTGATGCTGCTTCACGGCATGTTCTCCTACTCACTGGCGGTCACATTTGACAGTGCGTCTTATATTAAAACATTTGGTTTATCCGAAGGATTATGGTCTGACTCCGTCTGGTACGGACTGATTATTCTGACAGTCCTGGTTGTTATTGCCGCACAGGGTGAACGCCTGTTATTCAAAATTTCCGGTCCGATGGTGATTGTGAAATTCGGTATTATCGTATTACTCGGCGTGGTGATGGTGCCATACTGGAATTTCGCGAATATCACGGCATTTCCTGATATTCTGCCTTTTCTGCGGGATGTGTTTCTGACTCTGCCGTTTACACTGTTCTCTATCCTGTTTGTTCAGATTTTAAGCCCGATGAACATTGCTTACCGCCGGGTGGAAAAAGATAAACGTATCGCGACATACCGGGCTATCCGCGCCAACCGTGTCGCCTACATTATTTTAGCCGTTGCCGTGTTGTTCTTTGCGTTTTCATTCACGTTCTCAATCAGTCATGAACAAGCAGTTTCCGCATTTGAACAAAATATCTCTGCGCTGGCGATTGCCGCTCAGGTTATTCCGGGTTCCGTTGTGAAAGTCATGACGGCGATGCTCAATATTTTCGCTATCCTGACCGCGTTTCTCGGCATTTATCTGGGCTTCCAGGAAGCAATTAAAGGAATTGTTGTCAACGTTCTGAGCCGCTTTATGCCGCAGGAGCGAATCAATCACACCGTATTGCATTACAGCGTATGCGCAGGTGTTATCCTGGCTCTGTGGTTCTGGGTGTCCACGCGCTTTTCAATTCTCTTTTTCATGCAGCTCGGCGGCCCGTTATTCGGCATCGTCTCCTGCCTGATCCCGTGCTACCTGGTGTATCGCGTGCCGGTATTACATAAATACAAAGGGGCGACAGTCTGGTTTATCATCTTTTTTGGTGTGTTACTGTGCCTCTCTCCGTTCTTTAAATTTTTCGAATAATGCTGTATGAACAGCCCTGTTTATGTGTGAGGATTTTATGACGAAAAAAG