Homologs in group_3727

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2 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
PMI_RS01010 PMI_RS01010 21.2 Proteus mirabilis HI4320 - lipase family protein
PMI_RS06410 PMI_RS06410 24.1 Proteus mirabilis HI4320 - lipase family protein

Distribution of the homologs in the orthogroup group_3727

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3727

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS05125
Feature type CDS
Gene -
Product polymorphic toxin type 33 domain-containing protein
Location 1092529 - 1094196 (strand: -1)
Length 1668 (nucleotides) / 555 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3727
Orthogroup size 3
N. genomes 2

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Genomic region

Domains

PF06958 S-type Pyocin
PF15533 Bacterial toxin 33

Protein Sequence

MSEIRDCIDCDNYRYWLEIQLTDDVGQPLDNLPFTLKERGTDKSVSGVTDEQGLFRAEGLSARPLMLTADAQSLADKLTADNPGRPLPYPEDSLKSWCRTQGHILNEDNVAGTFSNELPERIYDMSPPQISRLSDYRNRHEGYFLIWPYSHRRVIAIRRITEKVYAKSVQRGAGNTDAGTETERLDNFGQYQTQPLLPDQPVAEAGFPIHYMLQLMGNTLSGGAAGQPYPGLQKTRQNDDDFFQQENSPRSEMSAQSQRKFILTLLNTVLPVGMFIAKEYASDSLTYDDLAEKAKNNGTATTRVRIKYQENTATGEQDVVSYATKGSNDQVRVRMGVKAPESEADEIRMSSRAYRSDGLPTPQSLATIYKFALDDGNIIYLGVDTDNKFVELTSSTHPDEFGGRGWHTGGEVDKIDVPADTGNHNPYLPGKTDSSGGFQVHNNGPVILTSPAPDEQGFNDYILITPIADVPAIYVYLSEMVGDNGEEKPPSIKVVNDKFLKNNNIDAHQIKKDFLGSKAEIKHYDIYADKDSGQLWIFRKGGKGEGIPTGEFINK

Flanking regions ( +/- flanking 50bp)

CGCCATGCAAAACATAAGGGATGGATGCCGTCAACTGACGGAGGGATGATGTGAGTGAAATAAGGGATTGTATTGATTGTGATAATTACCGTTACTGGCTGGAAATTCAGTTAACGGATGATGTCGGTCAGCCTCTTGATAATCTGCCGTTTACGCTGAAAGAACGGGGAACGGATAAATCGGTATCCGGTGTAACCGATGAACAGGGGCTTTTCCGGGCAGAAGGGCTGTCTGCCCGTCCACTGATGCTGACAGCCGATGCTCAGAGCCTGGCGGATAAATTAACAGCTGATAATCCCGGACGCCCTTTGCCGTATCCGGAAGACTCGCTGAAAAGCTGGTGCCGGACACAGGGGCATATTCTCAATGAGGATAATGTCGCCGGTACGTTCAGTAATGAATTACCTGAACGTATTTATGATATGTCTCCACCTCAGATATCCCGCCTCAGTGATTACCGAAACCGGCATGAAGGTTATTTCCTTATCTGGCCATATAGTCACCGGCGGGTGATTGCCATCCGGCGGATCACTGAAAAAGTCTATGCTAAGTCAGTACAGCGGGGAGCCGGAAATACGGATGCCGGGACTGAGACGGAAAGACTGGATAATTTCGGTCAATATCAGACTCAGCCATTACTACCGGATCAACCGGTTGCTGAGGCCGGATTTCCGATCCATTACATGCTTCAGTTAATGGGAAACACGTTATCCGGCGGTGCCGCCGGGCAGCCGTATCCCGGTCTTCAGAAGACCCGGCAGAATGATGATGATTTTTTCCAACAGGAAAATTCCCCCCGCAGCGAAATGTCCGCGCAGTCGCAGCGCAAATTTATACTCACCTTACTTAACACCGTATTGCCTGTCGGGATGTTTATTGCGAAAGAGTACGCCAGTGACTCACTGACCTATGACGATCTGGCTGAAAAAGCTAAAAATAATGGTACGGCAACAACCCGTGTCCGGATTAAATATCAGGAAAATACGGCAACCGGCGAACAGGACGTGGTGTCTTACGCCACAAAAGGCAGTAACGATCAGGTCCGGGTGCGTATGGGTGTTAAGGCGCCGGAATCTGAAGCGGATGAAATCCGGATGAGCAGCCGGGCTTACCGTTCGGACGGTCTGCCAACCCCGCAATCACTGGCGACTATTTATAAATTTGCGTTGGATGACGGAAATATTATCTATCTGGGTGTAGATACAGATAATAAATTCGTTGAGCTGACATCCTCCACACATCCGGACGAATTCGGCGGACGGGGCTGGCATACCGGCGGAGAAGTTGACAAAATAGATGTCCCGGCAGATACCGGTAATCACAATCCGTACCTTCCCGGAAAAACGGACAGCTCCGGCGGATTTCAGGTACATAATAACGGACCGGTGATTCTGACCAGCCCGGCACCGGATGAGCAGGGATTTAATGACTATATCCTGATCACACCGATAGCCGATGTTCCGGCGATTTATGTGTATTTGAGTGAGATGGTTGGGGATAATGGAGAAGAAAAACCGCCCAGTATAAAAGTAGTTAACGATAAATTCTTAAAGAACAATAACATAGATGCTCATCAAATAAAGAAAGATTTTCTTGGCTCTAAGGCTGAAATTAAGCATTACGATATTTATGCAGATAAGGATAGTGGTCAGTTATGGATATTCAGGAAAGGTGGTAAAGGTGAAGGTATTCCAACCGGTGAGTTCATTAATAAATAAAGAGTGTTTTTATGAATAAAACAACAGTAAAAGCAGAATTTTCAATTTAT