Homologs in group_3726

Help

2 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
PMI_RS00815 PMI_RS00815 27.9 Proteus mirabilis HI4320 - dimethyl sulfoxide reductase anchor subunit
PMI_RS05820 PMI_RS05820 66.2 Proteus mirabilis HI4320 - dimethyl sulfoxide reductase anchor subunit

Distribution of the homologs in the orthogroup group_3726

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_3726

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P76173 3.55e-10 62 32 3 160 3 ynfH Anaerobic dimethyl sulfoxide reductase chain YnfH Escherichia coli (strain K12)
P45002 1.78e-09 60 28 6 220 3 dmsC Anaerobic dimethyl sulfoxide reductase chain C Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P18777 3.26e-05 48 28 5 160 1 dmsC Anaerobic dimethyl sulfoxide reductase chain C Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS05060
Feature type CDS
Gene -
Product DmsC/YnfH family molybdoenzyme membrane anchor subunit
Location 1077431 - 1078303 (strand: -1)
Length 873 (nucleotides) / 290 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3726
Orthogroup size 3
N. genomes 2

Actions

Genomic region

Domains

PF04976 DMSO reductase anchor subunit (DmsC)

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3302 Energy production and conversion (C) C DMSO reductase anchor subunit DmsC

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07308 anaerobic dimethyl sulfoxide reductase subunit C Sulfur metabolism
Metabolic pathways		 -

Protein Sequence

MSEWPLVAFTLLVQSSVGVVIFSALFFCRLEKSLGNQRASLAMKPVLLTGAVLGCLGLLASTLHMGYPWNAFHALRHISTSWLSREIVFAALYLGALCLYTLFVLIKGRMNRSILALIGLLGLIDIYCMASLYFSTAMMTWMHVNTYILFFAAVFAAGGTIALGLTALRVKSVIDGTTTLRIVAVALGLIFLAVAVRMAAQPFFLEWLSEAAQNSDAITFPHSPLAAYATTSGLRIIAGALSISGILFLGFSLMRMRNTVLTSGLPVILSGSVLVFAGEVLNRFAFFIVQ

Flanking regions ( +/- flanking 50bp)

CTGGTGATAAAACCACACAAAGGCGCGCAGAATAAAGGGGAGGTTAAATCATGAGCGAGTGGCCGTTAGTTGCATTTACGTTATTAGTACAAAGCTCGGTCGGTGTTGTGATTTTTTCCGCACTTTTTTTCTGTCGTCTGGAAAAATCGCTGGGTAATCAGCGCGCAAGCCTTGCCATGAAACCGGTATTACTGACCGGCGCAGTTCTGGGCTGCCTCGGGTTGCTCGCCTCGACACTGCACATGGGGTATCCGTGGAATGCGTTTCATGCGCTGCGCCATATCAGCACCTCGTGGCTGAGCCGTGAGATTGTCTTTGCCGCGTTATATCTGGGGGCGCTGTGTCTTTATACGCTGTTTGTTCTGATCAAAGGGCGGATGAACCGGAGTATTCTGGCGCTGATTGGATTGCTCGGACTGATTGATATTTACTGTATGGCATCCCTGTATTTCAGTACTGCGATGATGACATGGATGCATGTGAATACCTACATCCTGTTCTTTGCCGCGGTATTTGCCGCAGGCGGTACGATTGCGCTGGGACTCACGGCGCTGCGGGTGAAGTCAGTCATTGACGGTACAACAACTCTGCGGATTGTCGCAGTGGCGCTGGGGCTGATTTTCCTGGCGGTTGCGGTACGAATGGCGGCTCAGCCATTCTTCCTTGAATGGTTGTCAGAAGCAGCACAAAACAGTGATGCGATAACCTTCCCGCACTCACCGCTGGCCGCTTACGCGACAACGTCCGGACTACGGATTATTGCCGGTGCATTATCAATCAGCGGAATTTTATTCCTCGGATTCAGTTTGATGCGGATGCGTAACACCGTACTGACCAGTGGTCTGCCGGTTATTTTATCCGGCTCAGTCCTTGTCTTTGCCGGTGAGGTGCTTAACCGGTTTGCGTTTTTTATTGTTCAGTAGCTATAGATCCCCTCTTTGAATTTGGCAAAGAGGGGATAACCAATCTGGTC