Homologs in group_2528

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_02305 FBDBKF_02305 87.4 Morganella morganii S1 crp cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases
EHELCC_02775 EHELCC_02775 87.4 Morganella morganii S2 crp cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases
NLDBIP_00685 NLDBIP_00685 87.4 Morganella morganii S4 crp cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases
LHKJJB_01350 LHKJJB_01350 87.4 Morganella morganii S3 crp cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases
HKOGLL_01390 HKOGLL_01390 87.4 Morganella morganii S5 crp cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases

Distribution of the homologs in the orthogroup group_2528

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2528

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P47200 7.17e-12 66 25 2 191 4 fnrA Transcriptional activator protein FnrA Stutzerimonas stutzeri
Q9AQ50 1.39e-11 65 26 3 191 3 fnr Fumarate nitrate reduction regulatory protein Klebsiella oxytoca
P23926 1.87e-11 65 25 2 191 4 anr Transcriptional activator protein anr Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P0A9E8 2.08e-11 65 26 3 191 3 fnr Fumarate and nitrate reduction regulatory protein Shigella flexneri
P0A9E5 2.08e-11 65 26 3 191 1 fnr Fumarate and nitrate reduction regulatory protein Escherichia coli (strain K12)
P0A9E6 2.08e-11 65 26 3 191 3 fnr Fumarate and nitrate reduction regulatory protein Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0A9E7 2.08e-11 65 26 3 191 3 fnr Fumarate and nitrate reduction regulatory protein Escherichia coli O157:H7
Q9LA24 3.44e-11 64 26 2 191 3 fnr Fumarate and nitrate reduction regulatory protein Shigella dysenteriae
Q8Z787 5.91e-11 63 26 3 191 3 fnr Fumarate and nitrate reduction regulatory protein Salmonella typhi
P0A2T8 6.78e-11 63 26 3 191 3 fnr Fumarate and nitrate reduction regulatory protein Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2T9 6.78e-11 63 26 3 191 3 fnr Fumarate and nitrate reduction regulatory protein Salmonella muenster
O85222 1.07e-10 63 24 2 194 2 anr Transcriptional activator protein Anr Pseudomonas protegens (strain DSM 19095 / LMG 27888 / CFBP 6595 / CHA0)
Q5SID7 1.11e-10 62 25 2 215 1 TTHA1437 Cyclic AMP receptor protein Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)
Q8ZE82 3.91e-10 61 25 2 191 3 fnr Fumarate and nitrate reduction regulatory protein Yersinia pestis
P0C6D0 5.86e-09 58 25 2 195 3 fnr Fumarate and nitrate reduction regulatory protein Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
A5F890 5.86e-09 58 25 2 195 3 fnr Fumarate and nitrate reduction regulatory protein Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
P29284 1.98e-08 56 25 4 225 4 flp Probable transcriptional regulator flp Lacticaseibacillus casei
P46148 2.22e-08 56 25 3 192 3 etrA Electron transport regulator A Shewanella oneidensis (strain ATCC 700550 / JCM 31522 / CIP 106686 / LMG 19005 / NCIMB 14063 / MR-1)
Q08530 6.97e-08 55 26 2 161 4 btr Transcriptional regulatory protein btr Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)
Q9EXQ1 3.92e-07 53 25 4 191 2 fnr Anaerobic regulatory protein Aggregatibacter actinomycetemcomitans
P45199 4.97e-07 52 26 5 205 3 fnr Anaerobic regulatory protein Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P23619 6.8e-07 52 26 4 184 4 hlyX Regulatory protein HlyX Actinobacillus pleuropneumoniae
Q9CMY2 8.06e-07 52 24 5 205 3 fnr Anaerobic regulatory protein Pasteurella multocida (strain Pm70)
Q01980 1.92e-06 50 22 3 199 1 aadR Transcriptional activatory protein AadR Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)
P9WMH3 4.8e-06 49 23 3 221 1 crp CRP-like cAMP-activated global transcriptional regulator Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WMH2 4.8e-06 49 23 3 221 1 crp CRP-like cAMP-activated global transcriptional regulator Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P29286 2.36e-05 47 23 5 205 2 fixK Nitrogen fixation regulation protein FixK Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110)
P0A2T6 5.62e-05 46 20 2 184 1 crp cAMP-activated global transcriptional regulator CRP Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2T7 5.62e-05 46 20 2 184 1 crp cAMP-activated global transcriptional regulator CRP Klebsiella aerogenes
P0ACK1 0.000144 45 20 2 184 3 crp cAMP-activated global transcriptional regulator CRP Shigella flexneri
P0ACJ8 0.000144 45 20 2 184 1 crp DNA-binding transcriptional dual regulator CRP Escherichia coli (strain K12)
P0ACJ9 0.000144 45 20 2 184 3 crp cAMP-activated global transcriptional regulator CRP Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ACK0 0.000144 45 20 2 184 3 crp cAMP-activated global transcriptional regulator CRP Escherichia coli O157:H7
Q79VI7 0.000221 44 22 3 221 1 glxR CRP-like cAMP-activated global transcriptional regulator Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)
P13295 0.000619 43 22 4 180 4 fixK Nitrogen fixation regulation protein FixK Rhizobium meliloti (strain 1021)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS04680
Feature type CDS
Gene -
Product Crp/Fnr family transcriptional regulator
Location 986158 - 986874 (strand: 1)
Length 717 (nucleotides) / 238 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2528
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF00027 Cyclic nucleotide-binding domain
PF13545 Crp-like helix-turn-helix domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0664 Signal transduction mechanisms (T) T cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K21563 CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator - -

Protein Sequence

MTFVKNTVYPARQMAILRSCPLFQAVSDESLPLVLANSSYLAFTAGELINHEGELVKACPLIISGQIDVFRHTWSGEEKVFGMFTAGELVAIAAIFMPHNRYPMSLRARTDGEALLLDKSAILQLCHACPAIMAQLLSRFSLKLYENINHIDWLTSSSAEQRLAAYLLDLKRCQQSDCVILPLSRGQLATKLGVRYETLSRLFSGWRQKAFIGIDKDAVRITNESYLAELATPSQRPF

Flanking regions ( +/- flanking 50bp)

TTATCATTTATAATCGCATCCATTCTAGGCGGCACTGAGAGGAAAGCCCTATGACATTTGTCAAAAATACCGTTTACCCTGCGCGGCAAATGGCGATCCTCCGATCGTGCCCGCTGTTTCAGGCCGTTTCGGATGAATCCCTGCCGCTGGTGCTGGCAAACAGCAGTTATCTTGCGTTTACGGCAGGGGAATTGATTAACCACGAAGGTGAGTTGGTAAAAGCATGCCCGCTTATTATTTCCGGACAAATAGATGTATTCCGTCATACCTGGTCCGGTGAAGAGAAAGTGTTCGGCATGTTTACGGCGGGTGAGCTGGTGGCTATTGCGGCGATATTTATGCCGCACAACCGGTATCCGATGAGTCTGCGGGCGCGGACAGACGGGGAGGCGCTGTTGCTGGATAAATCCGCCATTTTGCAACTGTGTCACGCCTGTCCGGCGATCATGGCGCAGCTACTCTCCCGTTTCAGTCTTAAATTGTATGAAAATATCAATCATATTGACTGGCTGACGTCCAGTTCGGCAGAGCAGAGGTTGGCAGCGTATCTGCTGGATCTGAAACGGTGTCAGCAATCTGACTGTGTTATTTTGCCGTTATCGCGCGGGCAGCTGGCGACAAAACTGGGGGTGCGCTATGAAACCCTGAGCCGGTTATTTTCCGGCTGGCGGCAGAAAGCGTTTATCGGGATAGATAAAGATGCGGTGCGGATAACGAATGAATCCTATCTGGCAGAGCTGGCAACGCCCTCACAGCGCCCGTTCTGATATTTTTTGGCAGAAGCGCGGATAATCAAAAACCAGATACTCTAAATAAT