Homologs in group_2515

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_02165 FBDBKF_02165 89.9 Morganella morganii S1 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase
EHELCC_02635 EHELCC_02635 89.9 Morganella morganii S2 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase
NLDBIP_00825 NLDBIP_00825 89.9 Morganella morganii S4 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase
LHKJJB_01210 LHKJJB_01210 89.9 Morganella morganii S3 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase
HKOGLL_01250 HKOGLL_01250 89.9 Morganella morganii S5 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase

Distribution of the homologs in the orthogroup group_2515

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2515

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
A1JJ50 2.01e-52 162 78 0 96 3 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
B1JLQ5 7.59e-52 160 78 0 96 3 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
Q66EZ4 7.59e-52 160 78 0 96 3 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase Yersinia pseudotuberculosis serotype I (strain IP32953)
A4TQM0 7.59e-52 160 78 0 96 3 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase Yersinia pestis (strain Pestoides F)
Q1CN20 7.59e-52 160 78 0 96 3 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase Yersinia pestis bv. Antiqua (strain Nepal516)
A9R0S7 7.59e-52 160 78 0 96 3 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase Yersinia pestis bv. Antiqua (strain Angola)
Q7CG46 7.59e-52 160 78 0 96 1 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase Yersinia pestis
B2K3F6 7.59e-52 160 78 0 96 3 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase Yersinia pseudotuberculosis serotype IB (strain PB1/+)
Q1C133 7.59e-52 160 78 0 96 3 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase Yersinia pestis bv. Antiqua (strain Antiqua)
A7FMK2 7.59e-52 160 78 0 96 3 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
A6TEB3 7.49e-51 158 70 0 98 3 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
A4WEQ9 1.65e-50 157 73 0 97 3 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase Enterobacter sp. (strain 638)
Q7N2D5 4.72e-50 156 71 0 99 3 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)
Q8Z2Y0 1.26e-49 155 75 0 96 3 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase Salmonella typhi
A9MZG6 1.26e-49 155 75 0 96 3 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
Q5PJE2 1.26e-49 155 75 0 96 3 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase Salmonella paratyphi A (strain ATCC 9150 / SARB42)
Q57HD8 1.26e-49 155 75 0 96 3 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase Salmonella choleraesuis (strain SC-B67)
Q8ZKP9 1.92e-49 154 75 0 96 2 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
B1LF97 7.47e-49 153 76 0 96 3 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase Escherichia coli (strain SMS-3-5 / SECEC)
P64461 7.47e-49 153 76 0 96 1 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase Escherichia coli (strain K12)
B1IRU2 7.47e-49 153 76 0 96 3 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
B1XEA6 7.47e-49 153 76 0 96 3 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase Escherichia coli (strain K12 / DH10B)
P64462 7.47e-49 153 76 0 96 3 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase Escherichia coli O157:H7
Q83L16 2.7e-48 151 75 0 96 3 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase Shigella flexneri
Q0T4L3 2.7e-48 151 75 0 96 3 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase Shigella flexneri serotype 5b (strain 8401)
A8A071 1.49e-47 149 75 0 96 3 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase Escherichia coli O9:H4 (strain HS)
P94425 7.57e-06 43 29 0 78 1 ycnE Putative monooxygenase YcnE Bacillus subtilis (strain 168)
P73602 2.2e-05 43 32 0 78 3 sll1783 Uncharacterized protein sll1783 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS04535
Feature type CDS
Gene lsrG
Product (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase
Location 959204 - 959503 (strand: -1)
Length 300 (nucleotides) / 99 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2515
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF03992 Antibiotic biosynthesis monooxygenase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1359 Energy production and conversion (C) C Quinol monooxygenase YgiN

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K11530 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase [EC:5.3.1.32] Quorum sensing -

Protein Sequence

MNVTLVEINVKADKVDEFIAVFRENHLGSVKEPGNLRFDVLQDPDVQTRFYIYEAYTDDAAVAAHKKTSHYLQCVEKLEALMTGPRKKTAFIGLMPEIK

Flanking regions ( +/- flanking 50bp)

CAAAACAGGCTCATGCATTGTTCCTGAGCGAAAAGAATAAGGGGTAAATTTTGAACGTAACATTAGTCGAAATTAATGTAAAAGCAGACAAAGTGGATGAATTTATTGCGGTATTCCGTGAAAATCATCTGGGATCAGTAAAAGAACCCGGTAACCTGCGTTTTGATGTGTTGCAGGATCCGGACGTTCAGACCCGTTTTTATATCTATGAAGCCTATACGGATGATGCCGCCGTTGCCGCACATAAGAAAACATCGCACTATTTACAGTGTGTTGAAAAACTGGAAGCCCTGATGACCGGCCCGCGTAAGAAAACCGCGTTTATCGGGTTAATGCCTGAAATCAAATAAGTATACCGTATCTGCTCCGTTAAGTGACCGCATATAGAGGCGGTCACTTT