Homologs in group_626

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_02010 FBDBKF_02010 79.3 Morganella morganii S1 yecM VOC family protein
EHELCC_02480 EHELCC_02480 79.3 Morganella morganii S2 yecM VOC family protein
NLDBIP_00980 NLDBIP_00980 79.3 Morganella morganii S4 yecM VOC family protein
LHKJJB_01055 LHKJJB_01055 79.3 Morganella morganii S3 yecM VOC family protein
HKOGLL_01095 HKOGLL_01095 79.3 Morganella morganii S5 yecM VOC family protein
PMI_RS05355 PMI_RS05355 53.8 Proteus mirabilis HI4320 - VOC family protein

Distribution of the homologs in the orthogroup group_626

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_626

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P52007 7.71e-58 182 48 3 189 1 yecM Protein YecM Escherichia coli (strain K12)
P44262 1.01e-38 134 39 4 178 4 HI_1581/HI_1582 Uncharacterized protein HI_1581/HI_1582 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS04375
Feature type CDS
Gene -
Product VOC family protein
Location 925818 - 926378 (strand: 1)
Length 561 (nucleotides) / 186 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_626
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF06185 YecM protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3102 General function prediction only (R) R Uncharacterized conserved protein YecM, predicted metalloenzyme

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K09907 uncharacterized protein - -

Protein Sequence

MKSTEQITALAALVAELPVFAGKLQQLADDLQLDLSAYEADHISLRTHDTELAEHWVAGLRQCATVLSDNNINGRPVYLFLLHQPLALLHWQIPVIELPFPKGKQYAHQGWEHVELVLPGEPATLTERAAALLPSPLPSGVIIKESHPRADADNERLPNPTLAVSRDNITIKFHPFTLQEIVESER

Flanking regions ( +/- flanking 50bp)

TGCTACCATCAGCGCCTTTCCGGGGTGGTAAATTCTCACAGGTGAGCATAATGAAAAGCACAGAACAGATTACGGCACTTGCCGCGCTGGTGGCGGAATTGCCGGTTTTTGCCGGGAAATTACAGCAGCTTGCTGATGATTTGCAGTTAGATCTGAGCGCGTATGAGGCAGACCATATCTCACTGCGCACACATGATACTGAATTGGCAGAGCACTGGGTGGCAGGGTTGCGTCAGTGTGCAACGGTATTATCGGATAATAATATCAACGGACGCCCGGTGTATCTGTTCTTGCTTCATCAGCCCCTCGCGCTGTTGCACTGGCAGATTCCGGTGATTGAACTGCCGTTTCCGAAAGGCAAACAGTATGCACATCAGGGATGGGAGCATGTTGAACTGGTACTGCCGGGAGAGCCTGCCACACTGACTGAACGCGCGGCGGCATTACTGCCGTCTCCGCTGCCGTCCGGGGTGATAATCAAAGAGAGTCATCCGCGCGCAGATGCAGATAATGAGCGGTTACCGAACCCGACCCTGGCGGTCAGCAGAGATAATATAACGATTAAATTTCATCCGTTTACGTTGCAGGAAATTGTTGAAAGTGAGCGCTGACCTGCAATTCTGACATTTGCGGGCGATTATCTTCCGGATATTTTGCATCT