COG3102


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG3102, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Uncharacterized conserved protein YecM, predicted metalloenzyme
Function(s) descr. General function prediction only (R)

Occurence in the database

COG3102 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_626 FBDBKF_02010 90375 90929 1 yecM VOC family protein Morganella morganii S1
1 group_626 EHELCC_02480 478195 478749 1 yecM VOC family protein Morganella morganii S2
2 group_626 NLDBIP_00980 201387 201941 -1 yecM VOC family protein Morganella morganii S4
3 group_626 LHKJJB_01055 190744 191298 1 yecM VOC family protein Morganella morganii S3
4 group_626 HKOGLL_01095 196255 196809 1 yecM VOC family protein Morganella morganii S5
5 group_626 F4V73_RS04375 925818 926378 1 VOC family protein Morganella psychrotolerans
6 group_626 PMI_RS05355 1171814 1172368 1 VOC family protein Proteus mirabilis HI4320