Homologs in group_2506

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_01870 FBDBKF_01870 93.2 Morganella morganii S1 trkG Trk-type K+ transport system, membrane component
EHELCC_02340 EHELCC_02340 93.2 Morganella morganii S2 trkG Trk-type K+ transport system, membrane component
NLDBIP_01120 NLDBIP_01120 93.2 Morganella morganii S4 trkG Trk-type K+ transport system, membrane component
LHKJJB_00915 LHKJJB_00915 93.2 Morganella morganii S3 trkG Trk-type K+ transport system, membrane component
HKOGLL_00955 HKOGLL_00955 93.2 Morganella morganii S5 trkG Trk-type K+ transport system, membrane component

Distribution of the homologs in the orthogroup group_2506

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2506

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P23849 0.0 590 60 1 486 1 trkG Trk system potassium uptake protein TrkG Escherichia coli (strain K12)
E1V6C5 4.82e-118 358 40 1 480 1 trkH Trk system potassium uptake protein TrkH Halomonas elongata (strain ATCC 33173 / DSM 2581 / NBRC 15536 / NCIMB 2198 / 1H9)
Q9L6L2 7.75e-118 357 40 0 480 3 trkH Trk system potassium uptake protein TrkH Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0AFZ9 7.43e-117 355 40 0 480 3 trkH Trk system potassium uptake protein TrkH Shigella flexneri
P0AFZ7 7.43e-117 355 40 0 480 1 trkH Trk system potassium uptake protein TrkH Escherichia coli (strain K12)
P0AFZ8 7.43e-117 355 40 0 480 3 trkH Trk system potassium uptake protein TrkH Escherichia coli O157:H7
Q87TN7 1.09e-115 352 41 1 482 1 trkH Trk system potassium uptake protein TrkH Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
P44843 1.86e-101 315 38 2 474 3 trkH Trk system potassium uptake protein TrkH Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
E1V6K4 2.59e-41 157 28 6 482 1 trkI Trk system potassium uptake protein TrkI Halomonas elongata (strain ATCC 33173 / DSM 2581 / NBRC 15536 / NCIMB 2198 / 1H9)
Q58880 6.65e-36 142 27 10 467 3 MJ1485 Uncharacterized cation transporter MJ1485 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS04225
Feature type CDS
Gene -
Product TrkH family potassium uptake protein
Location 893312 - 894778 (strand: -1)
Length 1467 (nucleotides) / 488 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2506
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF02386 Cation transport protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0168 Inorganic ion transport and metabolism (P) P Trk-type K+ transport system, membrane component

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03498 trk/ktr system potassium uptake protein - -

Protein Sequence

MLSSRSRVIIHLSSFLIVIYSLTLLLPMLVALAAGEQSFFAFATSFLIFFPAGIVCWYRSKTAELQLQTRDGFLVIAVFWLLFSIISAMPFWLDDHLNMAFEDALFEGISGITTTGASVFHNVTDLPRSVLYYRAQLNFIGGLGVIVLAVAIFPLLGIGGMRLYQSEMAGPFKDERLTPRLASSARNLWFTYLLLGFLCIVAFKFAGMSWFDALCHGLSTVSLGGFSTYSESIGYFNSSSIELVAGIFSLLSAVNFTLYFMALAKRSLKPLFSSTELRFYFAVAAFIIALVFFEVWRANMYSSAEESFVHAFFLTSSMLTDNGLATADYAQWPSHIIVLLLFASFFGGCVGSTCGGIKAVRFLILSKQSWQEVYSLIHPKAQTRIKIGDTVIQNRLINSVLSFFFLYIICTCIFIWCLNLMGYDLMTSFASVAACINNMGLGFGLTAPGFGEISPAAKYLLCFAMLLGRLEIYTLLVLFSVSFWRNWP

Flanking regions ( +/- flanking 50bp)

TTTTACTGATACAATTCGCTATTAAATAAAAAAAATCAGGTGGTCACCCTGTGCTCTCATCCCGCTCCCGAGTAATCATCCATCTGAGCAGTTTTCTGATTGTGATATACAGCCTGACGCTGCTGTTGCCGATGCTGGTTGCGCTGGCCGCCGGGGAGCAGAGTTTTTTTGCGTTTGCGACCAGTTTTCTGATTTTCTTTCCGGCGGGGATAGTTTGCTGGTATCGCAGTAAAACTGCGGAATTACAATTGCAGACCCGCGATGGCTTTCTGGTTATTGCTGTGTTCTGGCTGTTATTTTCAATTATCAGTGCTATGCCGTTCTGGCTGGACGACCACCTTAATATGGCATTTGAAGATGCATTATTTGAGGGGATTTCCGGTATTACCACAACGGGTGCCTCTGTCTTTCATAATGTCACTGACTTGCCCCGCTCTGTTCTTTATTACCGCGCTCAGCTCAATTTTATCGGCGGATTGGGTGTTATTGTCCTCGCCGTCGCGATATTTCCCCTGCTCGGAATAGGAGGGATGCGGTTATATCAGTCTGAAATGGCCGGTCCCTTTAAAGATGAACGCTTAACACCACGCCTGGCAAGTTCTGCCCGTAACTTATGGTTTACCTATTTATTGCTGGGTTTCCTCTGTATTGTCGCTTTTAAATTTGCCGGAATGTCGTGGTTTGATGCATTGTGTCACGGATTATCAACTGTTTCTCTCGGCGGATTTTCAACCTACAGTGAAAGTATCGGGTACTTTAACAGCTCATCCATTGAGCTGGTTGCCGGGATTTTTTCATTATTATCTGCGGTCAATTTTACACTCTATTTTATGGCACTGGCAAAGCGGAGTCTGAAACCCCTTTTCAGCAGTACTGAACTACGGTTCTATTTTGCCGTTGCCGCGTTTATTATCGCCCTGGTATTTTTTGAAGTCTGGCGGGCAAATATGTACTCCTCAGCGGAAGAGTCCTTTGTTCATGCTTTTTTCCTGACCAGTTCAATGCTGACAGATAATGGATTAGCTACCGCCGATTATGCACAGTGGCCGTCTCATATTATTGTATTACTACTGTTTGCCAGCTTTTTTGGTGGCTGTGTCGGTTCTACCTGTGGTGGTATTAAAGCTGTCCGTTTTTTGATTTTATCCAAACAGAGTTGGCAGGAAGTCTATTCCCTTATCCACCCGAAAGCACAGACGCGGATTAAAATCGGCGATACCGTTATTCAAAACCGGTTAATCAATTCCGTCCTGAGTTTCTTCTTTCTCTATATTATCTGTACCTGTATTTTTATCTGGTGTCTCAATCTGATGGGATACGATTTAATGACCTCCTTTGCCAGTGTGGCGGCCTGCATTAATAATATGGGGCTAGGGTTTGGATTAACCGCTCCGGGTTTCGGTGAAATATCACCGGCGGCAAAATATCTGCTCTGTTTTGCTATGTTATTAGGCCGCCTGGAGATTTATACCCTGCTGGTGCTGTTTTCTGTCAGTTTCTGGCGTAACTGGCCGTAATGATATTTATTCTTTTTACCGCACTGTTAGCCTGAAATATGACAGTCATA