Homologs in group_2972

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_16570 FBDBKF_16570 82.4 Morganella morganii S1 cDC14 Protein-tyrosine phosphatase
EHELCC_08435 EHELCC_08435 82.4 Morganella morganii S2 cDC14 Protein-tyrosine phosphatase
NLDBIP_08760 NLDBIP_08760 82.4 Morganella morganii S4 cDC14 Protein-tyrosine phosphatase
LHKJJB_05505 LHKJJB_05505 82.4 Morganella morganii S3 cDC14 Protein-tyrosine phosphatase
HKOGLL_05410 HKOGLL_05410 82.4 Morganella morganii S5 cDC14 Protein-tyrosine phosphatase

Distribution of the homologs in the orthogroup group_2972

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2972

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P76093 8.96e-119 356 46 5 414 1 ynbD Uncharacterized protein YnbD Escherichia coli (strain K12)
Q54Y32 2.32e-05 50 50 2 48 3 mpl3 MAP kinase phosphatase with leucine-rich repeats protein 3 Dictyostelium discoideum
Q5RD73 2.46e-05 48 43 3 64 2 DUSP3 Dual specificity protein phosphatase 3 Pongo abelii
P51452 2.46e-05 48 43 3 64 1 DUSP3 Dual specificity protein phosphatase 3 Homo sapiens
Q9D7X3 6.36e-05 47 40 4 76 1 Dusp3 Dual specificity protein phosphatase 3 Mus musculus

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS03100
Feature type CDS
Gene -
Product phosphatase PAP2/dual specificity phosphatase family protein
Location 662255 - 663595 (strand: -1)
Length 1341 (nucleotides) / 446 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2972
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF00782 Dual specificity phosphatase, catalytic domain
PF14378 PAP2 superfamily

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2453 Signal transduction mechanisms (T) T Protein-tyrosine phosphatase

Protein Sequence

MADVADIPAPVFTSRRKRWGAALLWLLFLAPFFFLTYGQVNSYTATLPDVPSLAFGWEHHIPFLPWTIIPYWSIDLFYGLSLFICTTLREQFIHGLRLIAASLAACAGFLLFPLKFSFPRPQTDGSAGWMFDQLEMFDLPFNQAPSLHIILLWLLWLRFRAHVPQKWQWFLHLWSALILISVLTTWQHHFIDVITGGAVGVLISYLLPVNTQWQWRTHRIRRGYQLAARYGTGGLLLATAAAVIGGQGWWLLWPALAFLCVAAGYCGAGTSVFQKDRNGQISPSAAVLLLPYRLLALISYYWYAHQCRHTSVVNAHIALGGYPQAPLSAAAVLDMTGEFPRSRYAKDLAYHCQPQLDLFPLTEEEIESAVYHLTRLAQSGQVYVHCKLGYTRSSTVVVAWLMRQGMAESLQQALALVRQARPQIVLREPTLAALTRWAARYGNKNE

Flanking regions ( +/- flanking 50bp)

CGCTTATTTTTCGCGGACTGACATACTATATTTTCACGGACTGACATACTATGGCTGATGTAGCGGATATACCTGCTCCGGTGTTTACTTCCCGCCGGAAACGGTGGGGAGCGGCCCTGCTCTGGCTGCTGTTTCTGGCACCGTTTTTTTTCCTGACATACGGACAGGTTAACAGTTATACAGCAACACTGCCGGATGTGCCCTCTCTTGCTTTCGGCTGGGAGCACCATATCCCTTTCCTGCCGTGGACCATTATTCCGTACTGGAGCATTGATCTCTTTTACGGGCTGTCACTGTTTATCTGCACCACGCTGCGCGAGCAGTTTATTCACGGACTGCGGCTGATAGCTGCCTCTCTGGCGGCCTGCGCCGGTTTTCTGCTGTTTCCGCTGAAATTCAGTTTTCCCCGCCCACAAACAGACGGCTCTGCCGGCTGGATGTTTGATCAGCTGGAGATGTTTGACCTGCCGTTTAACCAGGCCCCATCTTTGCACATTATTTTGCTGTGGCTGCTTTGGCTGCGTTTCCGTGCGCATGTACCGCAAAAATGGCAGTGGTTTCTGCATCTGTGGTCCGCACTTATCCTGATCTCTGTCCTGACCACCTGGCAGCATCATTTTATTGATGTTATTACCGGCGGTGCAGTCGGTGTACTGATCAGTTATCTGCTGCCGGTTAATACACAGTGGCAATGGCGCACCCACCGTATTCGCCGGGGTTATCAGTTAGCAGCGCGATACGGGACAGGCGGACTGCTGCTTGCCACTGCCGCCGCTGTTATTGGTGGTCAGGGCTGGTGGCTGTTATGGCCCGCACTGGCCTTTTTATGTGTGGCAGCAGGCTATTGCGGTGCCGGAACCTCTGTCTTTCAGAAAGATAGAAACGGGCAGATTTCCCCGTCTGCCGCCGTGCTGTTACTGCCTTATCGCCTTCTGGCGCTAATCAGCTATTATTGGTATGCGCATCAGTGCCGCCATACCAGTGTGGTAAATGCGCATATCGCGCTGGGAGGATACCCGCAAGCACCGTTGTCCGCTGCCGCCGTTCTGGATATGACCGGTGAATTTCCCCGCAGCCGTTATGCTAAAGATCTGGCTTATCATTGCCAGCCGCAGTTGGATCTTTTCCCGCTGACAGAAGAAGAGATTGAATCCGCAGTGTATCATCTGACCAGGCTTGCGCAGTCCGGTCAGGTTTATGTTCACTGTAAGCTGGGTTACACCCGCAGCAGTACAGTGGTGGTTGCGTGGCTGATGAGACAGGGAATGGCGGAGAGCCTGCAACAGGCGCTGGCGTTAGTCAGACAAGCACGCCCGCAGATTGTACTGCGGGAACCAACCCTTGCCGCACTAACCCGCTGGGCAGCCCGTTACGGAAATAAAAATGAATAATATAACGTATGATAATCAGGTAATTGTTATTTTTACGGCGGGCTGGCGTT