Homologs in group_3825

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1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
PMI_RS11710 PMI_RS11710 50.9 Proteus mirabilis HI4320 - 3-deoxy-7-phosphoheptulonate synthase class II

Distribution of the homologs in the orthogroup group_3825

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3825

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P80574 2.73e-123 367 42 2 434 1 aroH Phospho-2-dehydro-3-deoxyheptonate aldolase Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
P29976 1.1e-117 355 42 3 443 2 DHS1 Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic Arabidopsis thaliana
Q00218 3.42e-115 348 42 3 439 2 DHS2 Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic Arabidopsis thaliana
P27608 6.1e-115 349 41 4 439 2 DHAPS-1 Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic Nicotiana tabacum
A0A067XH53 9.97e-115 348 41 3 440 2 DAHP1 Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic Petunia hybrida
P37822 4.13e-114 345 42 3 439 2 SHKB Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic Solanum tuberosum
Q75W16 2.51e-113 345 41 5 448 2 DAHPS2 Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic Oryza sativa subsp. japonica
Q75LR2 1.53e-112 343 42 5 445 2 DAHPS1 Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic Oryza sativa subsp. japonica
A0A067XGX8 1.09e-111 339 41 3 435 2 DAHP2 Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic Petunia hybrida
P37215 1.45e-111 339 41 3 439 2 None Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic Solanum lycopersicum
P21357 3.36e-111 339 40 3 439 1 SHKA Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic Solanum tuberosum
P37216 9.18e-111 338 40 3 439 2 None Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic Solanum lycopersicum
P80576 2.93e-98 304 38 5 454 1 aro-8 Phospho-2-dehydro-3-deoxyheptonate aldolase Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
O53512 9.17e-98 302 39 7 431 1 aroG Phospho-2-dehydro-3-deoxyheptonate aldolase AroG Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
A0R033 2.67e-96 298 38 7 439 3 aroG Phospho-2-dehydro-3-deoxyheptonate aldolase AroG Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155)
A0MH68 4.85e-80 257 37 5 417 2 DHS1 Probable phospho-2-dehydro-3-deoxyheptonate aldolase, chloroplastic Catharanthus roseus
Q51789 2.35e-77 248 36 4 380 3 phzC Probable phospho-2-dehydro-3-deoxyheptonate aldolase Pseudomonas fluorescens
Q51517 7.07e-73 236 36 5 375 3 phzC Probable phospho-2-dehydro-3-deoxyheptonate aldolase Pseudomonas chlororaphis
P55911 4.37e-40 142 47 2 144 3 None Phospho-2-dehydro-3-deoxyheptonate aldolase (Fragment) Streptomyces lividans

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS02715
Feature type CDS
Gene -
Product 3-deoxy-7-phosphoheptulonate synthase class II
Location 571045 - 572262 (strand: 1)
Length 1218 (nucleotides) / 405 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3825
Orthogroup size 2
N. genomes 2

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Genomic region

Domains

PF01474 Class-II DAHP synthetase family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3200 Amino acid transport and metabolism (E) E 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase, class II

Kegg Ortholog Annotation(s)

Protein Sequence

MIKKQDGLQEWTPSSWMQFPAQQQPDYPEPESVRYVQQQLQAAPPLVSVSEIQSLTLALKQVSDGQGFILQCGDCAEAFSQCREDVLNDWTDTVSQMTTLLCGGLSQPVLKIGRIAGQYAKPRSSPDEARNGISLPSYRGDIINGHEFSVAQRIPDPQRMLGAYHRAAVTLNALHNNSLRQPGRSDTVFDPFYVSHEALLLPYDSALTRLNQADKLWYNGAAHTVWLGDRTSGPSEAHVEYLRGIANPVGIKCGPSMTAEKLGALLQRLNPQNKPGKIMLIVRLGVAHIREKLPLLLQAVAKLKSPVIWLTDPMHGNTRSTMSGLKTRDFATVCEEVRLFMQILRGQGVHPGGLHLEMTGRDVTECTGGLQRIADDDVGGRYESLCDPRLNRSQSAEIAGLTGQF

Flanking regions ( +/- flanking 50bp)

TTACCTGGCCACATCACAAGATCGTACATAACTATTTCAGGAGTTGTCAGGTGATAAAAAAACAGGACGGGCTGCAGGAATGGACGCCTTCCTCATGGATGCAATTTCCGGCTCAGCAGCAGCCGGATTATCCGGAGCCGGAGTCAGTCCGGTATGTTCAGCAACAGCTACAGGCAGCACCACCGCTGGTATCTGTCTCTGAGATACAATCACTGACCCTGGCATTAAAGCAGGTCAGTGATGGTCAGGGGTTTATTCTGCAATGCGGGGACTGCGCCGAAGCATTTTCGCAATGCCGTGAGGATGTACTCAATGACTGGACTGACACGGTATCACAAATGACCACGCTTTTGTGCGGCGGATTATCGCAGCCGGTATTGAAAATCGGGCGTATTGCCGGTCAGTACGCCAAACCACGCAGCAGTCCGGATGAGGCGCGCAATGGTATTTCACTGCCGAGCTATCGCGGGGATATTATTAATGGCCACGAATTTTCTGTGGCACAGCGGATACCTGATCCGCAAAGGATGCTGGGTGCTTACCACCGTGCGGCGGTCACTCTGAATGCTCTGCATAATAACAGTCTCCGTCAGCCAGGCAGATCAGATACGGTATTTGATCCGTTCTATGTCAGTCATGAGGCACTGCTATTGCCTTATGACAGCGCACTGACCCGTCTGAATCAGGCGGATAAGTTATGGTATAACGGCGCGGCGCATACTGTCTGGCTGGGGGATCGCACCAGCGGGCCATCTGAGGCGCATGTGGAATATCTGCGGGGAATAGCGAACCCTGTGGGTATAAAATGCGGACCGTCGATGACGGCGGAAAAGCTGGGCGCATTATTACAACGGCTTAATCCGCAGAATAAACCCGGCAAAATTATGCTGATTGTCAGGCTGGGTGTGGCACATATCCGGGAAAAACTACCTCTGTTATTACAGGCGGTGGCAAAACTGAAAAGTCCGGTTATCTGGCTGACAGATCCGATGCACGGCAACACCCGCAGTACAATGTCCGGTCTGAAAACCCGTGATTTTGCTACTGTGTGTGAAGAGGTTCGTCTCTTTATGCAGATTTTACGCGGGCAGGGCGTGCATCCGGGCGGTCTGCATCTGGAAATGACAGGGCGCGATGTGACAGAGTGTACAGGCGGCTTGCAGCGGATTGCCGATGATGATGTCGGCGGGCGGTATGAATCACTGTGTGACCCGAGACTGAACCGTTCTCAGTCGGCAGAGATTGCCGGGCTGACAGGTCAGTTCTGATGGCTGTATAAGTCATAATTAAATATGACAGATAAAAAAATCCCGGCCGG