Homologs in group_1920

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_14285 FBDBKF_14285 90.9 Morganella morganii S1 rhaT Permease of the drug/metabolite transporter (DMT) superfamily
EHELCC_07995 EHELCC_07995 90.9 Morganella morganii S2 rhaT Permease of the drug/metabolite transporter (DMT) superfamily
NLDBIP_08320 NLDBIP_08320 90.9 Morganella morganii S4 rhaT Permease of the drug/metabolite transporter (DMT) superfamily
LHKJJB_05945 LHKJJB_05945 90.9 Morganella morganii S3 rhaT Permease of the drug/metabolite transporter (DMT) superfamily
HKOGLL_04970 HKOGLL_04970 90.9 Morganella morganii S5 rhaT Permease of the drug/metabolite transporter (DMT) superfamily
PMI_RS08795 PMI_RS08795 68.1 Proteus mirabilis HI4320 - DMT family transporter

Distribution of the homologs in the orthogroup group_1920

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1920

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P37511 1.09e-19 90 25 6 289 3 yyaM Uncharacterized transporter YyaM Bacillus subtilis (strain 168)
O29740 1.16e-12 70 26 8 279 3 AF_0510 Uncharacterized transporter AF_0510 Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)
O29973 2.82e-08 57 27 6 278 3 AF_0266 Uncharacterized transporter AF_0266 Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)
P39649 6.25e-07 53 25 10 285 3 ywfM Uncharacterized transporter YwfM Bacillus subtilis (strain 168)
Q9M0B8 6.62e-07 53 22 10 327 3 At4g30420 WAT1-related protein At4g30420 Arabidopsis thaliana
O31540 1.58e-06 52 25 4 232 3 yetK Uncharacterized transporter YetK Bacillus subtilis (strain 168)
O31448 4.78e-06 50 25 10 303 3 ybfH Uncharacterized transporter YbhF Bacillus subtilis (strain 168)
Q9FL08 4.54e-05 48 27 11 298 2 At5g40240 WAT1-related protein At5g40240 Arabidopsis thaliana
P42194 5.28e-05 47 29 9 207 3 pecM Protein PecM Dickeya dadantii (strain 3937)
O34416 8.85e-05 47 21 4 274 3 yoaV Uncharacterized transporter YoaV Bacillus subtilis (strain 168)
Q9SUD5 0.000877 44 23 13 311 2 At4g28040 WAT1-related protein At4g28040 Arabidopsis thaliana

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS02625
Feature type CDS
Gene -
Product DMT family transporter
Location 553087 - 554010 (strand: -1)
Length 924 (nucleotides) / 307 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1920
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00892 EamA-like transporter family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0697 Carbohydrate transport and metabolism (G)
Amino acid transport and metabolism (E)
General function prediction only (R)		 GER Permease of the drug/metabolite transporter (DMT) superfamily

Protein Sequence

MKNLLFPLGAVLIWSVNAVVNKLAAGAIAPGAISFYRWALALALMTPFLLIPVWRQRAVVKQHAWKLFILGFLGMGLYQSLAYYAAYTVSATFMGIITSLIPLLTVILSIPVLRIAPTVGIVLGTILSLSGLTWLISKGNPAVLLTQGLGQGEMLMFIAGLAYAFYGVLTKRWAIPLSSIHSLYMQIVFGVILLIPVFLSAGNVSLTSDNIGLVLYAGIAASIFAPLLWILGVTRLGANAASIFMNLAPILTAIIAAVFLKEELHSYHIIGGGVVLIGVILAQRLRTPLTQVLRRKTKKTASVNTTL

Flanking regions ( +/- flanking 50bp)

AAGACAGATTACACTAACGCACCTGCCTGATAAATAAAATGAGTTTACTGATGAAAAACCTGCTTTTCCCCCTGGGGGCTGTATTAATCTGGTCCGTCAATGCGGTGGTGAATAAACTCGCCGCAGGCGCAATTGCCCCGGGAGCCATCTCCTTTTACCGCTGGGCGCTGGCACTGGCGCTGATGACGCCCTTCCTGCTAATCCCTGTCTGGCGACAGCGTGCAGTAGTGAAACAGCACGCATGGAAATTATTTATCCTCGGATTTCTGGGAATGGGGCTCTATCAGAGTCTTGCCTATTACGCCGCGTATACGGTCAGCGCCACCTTTATGGGAATTATTACATCACTTATCCCGCTGCTGACGGTAATTTTAAGCATTCCGGTACTGCGTATCGCACCGACAGTCGGTATTGTACTCGGGACAATCCTTTCCCTGAGCGGTCTGACCTGGCTTATCAGTAAAGGGAACCCGGCGGTTCTTCTGACGCAGGGGCTGGGACAGGGTGAAATGCTGATGTTTATCGCGGGGCTGGCGTATGCCTTTTATGGTGTACTGACCAAGCGCTGGGCAATTCCGCTTTCCAGTATTCATTCACTGTATATGCAGATTGTGTTTGGTGTGATCCTGCTTATCCCGGTTTTCCTGAGTGCCGGTAATGTGTCACTGACGTCTGATAATATCGGGCTGGTGCTGTATGCAGGGATTGCCGCCTCGATTTTTGCACCGCTGTTGTGGATCCTCGGTGTGACCCGGTTAGGGGCAAATGCAGCATCCATATTTATGAACCTGGCACCGATATTGACGGCAATTATCGCAGCCGTCTTCCTGAAAGAAGAACTGCACAGTTATCATATTATCGGCGGCGGCGTGGTACTGATTGGCGTGATCCTCGCCCAGCGCCTGCGCACACCACTGACACAGGTTTTGCGCCGCAAGACTAAAAAAACGGCCTCTGTAAATACCACTCTGTAAGCACAAGCGCGTCTGCCCGGGACGCGCCTGTTTTTTTATTTTTTTACGTT