Homologs in group_3643

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4 homologs were identified in 3 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
NLDBIP_19040 NLDBIP_19040 77.2 Morganella morganii S4 - DUF2570 domain-containing protein
LHKJJB_18930 LHKJJB_18930 77.2 Morganella morganii S3 - DUF2570 domain-containing protein
F4V73_RS02065 F4V73_RS02065 84.3 Morganella psychrotolerans - hypothetical protein
F4V73_RS19565 F4V73_RS19565 - Morganella psychrotolerans - hypothetical protein

Distribution of the homologs in the orthogroup group_3643

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3643

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS02290
Feature type CDS
Gene -
Product hypothetical protein
Location 483245 - 483628 (strand: 1)
Length 384 (nucleotides) / 127 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3643
Orthogroup size 5
N. genomes 3

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Genomic region

Protein Sequence

MIDNAYTSFNIFDRAAAENASRNMQAEAKSQEKQIEYRTIIRKESTCNLYIPQSVADGLLSHAYTLRESAMRSSPGITDTTGAGAITTHRLTYCWAAEWIEPLLTALDVVNGQLMGIRKADVERNEK

Flanking regions ( +/- flanking 50bp)

TCAGCCGGGCAATCGGAAGGGCAGCATAAAGACAAAGTGATCAGCAAAAGGTGATTGATAACGCCTACACCAGCTTTAATATCTTTGACCGCGCTGCTGCCGAGAATGCCAGCCGGAACATGCAGGCAGAAGCTAAATCACAGGAGAAACAGATTGAATACCGCACCATCATCCGTAAAGAGTCTACCTGCAATTTATATATTCCTCAGTCTGTTGCTGACGGGCTGCTCAGTCATGCCTACACCCTCCGTGAATCAGCAATGCGTTCCTCTCCCGGCATAACTGACACAACCGGTGCTGGTGCCATTACCACCCACCGACTGACATATTGCTGGGCGGCTGAGTGGATTGAGCCGTTGCTGACTGCACTTGATGTAGTGAACGGGCAACTAATGGGTATCCGGAAGGCAGATGTAGAGAGGAATGAAAAGTAACAGTAGATAAGGTCATACTCCTGGGTAACGATACCGATTAAAACGAAACA