Homologs in group_2903

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_13120 FBDBKF_13120 87.2 Morganella morganii S1 - Phage terminase, large subunit
EHELCC_19465 EHELCC_19465 87.2 Morganella morganii S2 - Phage terminase, large subunit
NLDBIP_19885 NLDBIP_19885 83.2 Morganella morganii S4 - Terminase large subunit GpA endonuclease domain-containing protein
LHKJJB_19850 LHKJJB_19850 82.6 Morganella morganii S3 - Terminase large subunit GpA endonuclease domain-containing protein
HKOGLL_05950 HKOGLL_05950 87.2 Morganella morganii S5 - Phage terminase, large subunit

Distribution of the homologs in the orthogroup group_2903

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2903

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P36693 3e-13 76 23 28 623 3 2 Terminase, large subunit Enterobacteria phage P21
P03708 3.37e-11 70 24 33 666 1 A Terminase, large subunit Escherichia phage lambda

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS02085
Feature type CDS
Gene -
Product phage terminase large subunit family protein
Location 446341 - 448452 (strand: 1)
Length 2112 (nucleotides) / 703 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2903
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF05876 Phage terminase large subunit gpA, ATPase domain
PF20454 Terminase large subunit gpA, endonuclease domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG5525 Mobilome: prophages, transposons (X) X Phage terminase, large subunit GpA

Protein Sequence

MSSGYASAAQIRRDVSVLLRPPRRIPVAAAVKKYMRVPMGGGSAIPWEDTLTPYIIEPMNCLTSRQYDAVIFVGPARTGKSLGLVDGWIVYTIVCDPADFLLIQMTEDKAREHSKKRLDRTFRVSPEVAKRLSPRTNDNNVHDKTFRAGNYLKIGWPSVNIMSSSDYRFVALTDYDRFPEDIDGEGDAFSLASKRTTTFMSAGMTLVESSPGREIIDPKWTPSSPHEAPPTTGILSLYNRGNRQRWYWPCPHCGDYFQPAFDAVAGHRDDPDPVAASEAAYIECPHCRGHIAGNEKRKLNNLGVWLADGQVIDKNGTVIGDGRRSRVASFWMEGPAAAYQTLSQLVYKYLTAEQEYELTLSEETLKTVINTDWGLPYRPKHSQEQRQSEELLARTEDLGVRCVPEGVRFLVAAVDVQGGKKRRFVVQVTGYGEKGERWIVDRFEITQSLRTDERGECVRIHPGSYREDWKLLISDVLEKTYPLRTHPAIRMGIMALGVDSGGEPGVTDNAYSFWRECRREGLSRKVFLFKGGSRRGGSKLITKSYPDNTGRSDRHAKATGDVPLYLLQTDNLKDRIAAVLSRDTPGPNYVHFPDWLDDSFYDELTYEERGINGKWEPPGRGANEAFDLMVYTHALVILKGYEKIKWEKPPPWARLPDLLPENTTFPADTTIISSTVPTKPEKPKKRKTASAWVPVSPSGGGWI

Flanking regions ( +/- flanking 50bp)

CTCCGTGATTTGCTGGCGGCGGAAGTGGAAAATGCGGAGGATACTCAGGAATGAGTTCAGGCTATGCATCAGCGGCACAAATACGCCGTGACGTTTCCGTTCTGTTAAGACCTCCGCGCCGGATACCGGTTGCGGCGGCAGTAAAAAAATACATGCGGGTGCCGATGGGCGGCGGCAGCGCAATACCGTGGGAAGATACTCTGACGCCCTACATTATAGAGCCGATGAACTGCCTGACATCCCGTCAGTACGATGCCGTGATATTTGTCGGTCCGGCACGAACCGGTAAATCGCTGGGGCTTGTCGATGGCTGGATTGTGTACACGATTGTATGTGATCCGGCAGATTTCCTGCTCATTCAGATGACCGAAGATAAAGCCCGCGAACACTCTAAAAAGCGGCTTGATCGGACATTTCGCGTCAGCCCGGAAGTCGCGAAACGGCTGAGTCCACGTACCAACGACAACAACGTTCACGACAAAACATTCCGCGCAGGTAATTACCTGAAAATCGGCTGGCCATCAGTCAATATTATGTCGTCCTCCGATTACCGTTTCGTGGCACTGACCGACTACGACCGCTTCCCGGAAGATATCGACGGAGAAGGCGATGCCTTTTCCCTCGCATCCAAACGTACCACTACCTTTATGTCCGCCGGAATGACGCTGGTGGAAAGCTCCCCCGGACGGGAGATTATTGATCCGAAATGGACGCCTTCCTCGCCCCACGAAGCCCCGCCGACCACCGGTATTCTGTCACTGTACAACCGGGGCAACCGTCAGCGCTGGTACTGGCCGTGTCCGCACTGCGGCGACTATTTTCAGCCTGCTTTTGATGCCGTTGCCGGTCACCGGGACGACCCTGATCCGGTCGCAGCCAGTGAAGCCGCTTACATTGAGTGTCCGCATTGCCGTGGTCATATAGCGGGCAATGAAAAACGAAAACTGAATAATCTCGGTGTCTGGCTGGCAGATGGTCAGGTGATCGATAAAAACGGCACTGTCATTGGAGACGGGCGGCGCTCACGGGTAGCATCGTTCTGGATGGAAGGTCCGGCTGCTGCCTATCAGACGCTGTCTCAGCTGGTCTATAAATACCTGACCGCCGAACAGGAATACGAACTCACCCTGAGCGAGGAAACGCTGAAAACGGTAATCAACACGGATTGGGGATTGCCGTACCGACCGAAACATTCACAGGAGCAGCGCCAGTCAGAAGAATTGCTGGCGAGAACAGAAGATCTCGGTGTGCGTTGTGTGCCGGAAGGCGTCCGTTTTCTGGTGGCGGCAGTGGATGTGCAGGGCGGCAAAAAACGCCGGTTTGTGGTTCAGGTCACCGGATACGGTGAAAAGGGGGAGCGCTGGATTGTGGATCGGTTTGAGATCACGCAATCACTGCGGACAGATGAACGCGGCGAATGTGTCAGGATCCATCCCGGATCATACCGCGAGGACTGGAAACTTCTCATTTCGGATGTGCTGGAGAAAACCTATCCCCTGCGGACGCATCCGGCGATCCGGATGGGCATTATGGCGCTGGGTGTTGATTCAGGCGGGGAACCGGGTGTGACCGACAATGCTTATTCATTCTGGCGTGAGTGCCGCCGTGAGGGTCTCAGCCGCAAGGTGTTTCTGTTCAAGGGCGGTAGCCGCAGGGGCGGATCAAAACTTATCACCAAATCCTATCCGGACAATACCGGGCGCTCTGATCGTCATGCAAAAGCGACCGGGGATGTGCCGTTGTACCTGTTGCAGACGGATAATCTGAAAGACCGGATTGCTGCCGTACTGAGCCGTGATACGCCCGGACCGAACTATGTCCATTTTCCGGATTGGCTGGATGATTCATTTTATGACGAACTGACGTACGAAGAGCGTGGCATTAACGGTAAATGGGAGCCGCCCGGCAGAGGCGCAAATGAAGCCTTTGACCTGATGGTCTACACTCATGCGCTGGTTATTCTGAAAGGGTACGAAAAAATCAAATGGGAGAAGCCGCCGCCCTGGGCGCGGCTGCCTGATCTCCTGCCGGAAAATACCACATTCCCCGCTGACACCACGATTATCTCATCAACAGTACCCACTAAACCGGAGAAGCCGAAAAAACGTAAGACGGCTTCGGCGTGGGTGCCCGTTTCACCATCAGGAGGTGGCTGGATATGACTATTGCGGAAATTGACGACATGATCCGGCAGTACATGGAGGCAGAGTGC