Homologs in group_2923

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_13120 FBDBKF_13120 98.2 Morganella morganii S1 - Phage terminase, large subunit
EHELCC_19465 EHELCC_19465 98.2 Morganella morganii S2 - Phage terminase, large subunit
LHKJJB_19850 LHKJJB_19850 98.5 Morganella morganii S3 - Terminase large subunit GpA endonuclease domain-containing protein
HKOGLL_05950 HKOGLL_05950 98.2 Morganella morganii S5 - Phage terminase, large subunit
F4V73_RS02085 F4V73_RS02085 83.2 Morganella psychrotolerans - phage terminase large subunit family protein

Distribution of the homologs in the orthogroup group_2923

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2923

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P03708 9.07e-05 47 25 14 285 1 A Terminase, large subunit Escherichia phage lambda

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_19885
Feature type CDS
Gene -
Product Terminase large subunit GpA endonuclease domain-containing protein
Location 70 - 1083 (strand: 1)
Length 1014 (nucleotides) / 337 (amino acids)
In genomic island -

Contig

Accession ZDB_566
Length 2417 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2923
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF20454 Terminase large subunit gpA, endonuclease domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG5525 Mobilome: prophages, transposons (X) X Phage terminase, large subunit GpA

Protein Sequence

MINTDWGLPYRPKHTQDQRKAEELLARAEDLGIRCVPEGVRFLVATVDVQAGKNRRFVVQVTGYGEKGERWIVDRFDITQSLRTDGNGECVRIHPGAYPEDWKLLITDVLDKTYPLSGHPAIRMPVMMLGVDTGGESGVTDNAYAFWRQCRRDGISRKVFLFKGGSRTGAKLITKSYPDNTGRSDRQAKAAGDVPLYLLQTDNLKDRVAAALSRDMPGPNYVHFPDWLDDSFYDELTYEERLTSGKWEKPGRGANEAFDLMVYAHALVIIKGYEKIKWDKPPPWARLPDIPVIPPENTDSPDNITLISTTGPAKPKKPKKRKASAWAPVSSSGGGWI

Flanking regions ( +/- flanking 50bp)

CCGCCGAACAGGAATATGAGCTCACCCTGAGCGAAGAAACCCTGAAAACGGTGATCAATACGGACTGGGGGCTGCCGTACCGGCCGAAACATACTCAGGATCAGCGCAAGGCAGAAGAACTGCTGGCGCGGGCTGAGGATCTCGGGATCCGCTGTGTGCCGGAAGGTGTTCGCTTTCTGGTGGCAACCGTCGACGTGCAGGCCGGGAAAAACCGCCGGTTTGTGGTTCAGGTCACCGGCTACGGTGAAAAAGGTGAACGCTGGATTGTGGACAGGTTTGATATCACCCAATCCCTGCGGACGGACGGCAACGGCGAGTGTGTCCGTATTCATCCCGGTGCCTATCCGGAGGACTGGAAGCTGCTGATAACAGATGTGCTGGATAAAACATATCCGTTGTCCGGACATCCGGCGATCAGAATGCCCGTCATGATGCTGGGGGTGGATACCGGCGGTGAAAGCGGTGTCACTGATAACGCGTATGCTTTCTGGCGGCAGTGCCGCCGTGACGGCATCAGCCGCAAAGTGTTTCTGTTCAAGGGGGGCAGCCGTACCGGCGCAAAACTGATCACCAAATCCTATCCGGATAACACCGGACGCTCTGACCGGCAGGCGAAAGCCGCCGGGGATGTGCCGTTATATCTGCTGCAGACTGACAACCTGAAAGACCGGGTGGCTGCTGCACTGAGCCGTGATATGCCGGGCCCGAACTATGTGCATTTTCCGGACTGGCTGGATGACTCTTTCTATGACGAACTGACCTATGAGGAGCGGCTGACCAGTGGTAAATGGGAAAAGCCCGGGCGGGGCGCAAACGAAGCCTTTGACCTGATGGTATACGCCCATGCACTGGTGATCATAAAGGGGTACGAGAAAATCAAATGGGATAAACCGCCGCCCTGGGCACGGTTACCCGATATTCCTGTTATTCCGCCTGAAAACACTGACTCCCCCGACAATATCACCCTTATTTCAACAACCGGACCCGCGAAACCGAAGAAACCGAAAAAACGGAAAGCATCGGCGTGGGCCCCTGTTTCATCATCCGGAGGTGGCTGGATATGACCATAGAAGAGATTGACGACATGATCCGGCAGTACGCGGAAGCGGAACGC