Homologs in group_2336

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_18340 FBDBKF_18340 81.8 Morganella morganii S1 pasI RnfH family protein
EHELCC_18375 EHELCC_18375 81.8 Morganella morganii S2 pasI RnfH family protein
NLDBIP_18300 NLDBIP_18300 81.8 Morganella morganii S4 pasI RnfH family protein
LHKJJB_18495 LHKJJB_18495 81.8 Morganella morganii S3 pasI RnfH family protein
HKOGLL_18230 HKOGLL_18230 81.8 Morganella morganii S5 pasI RnfH family protein
PMI_RS09395 PMI_RS09395 64.9 Proteus mirabilis HI4320 - RnfH family protein

Distribution of the homologs in the orthogroup group_2336

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2336

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
B2VEC2 1.39e-44 142 69 0 95 3 rnfH Protein RnfH Erwinia tasmaniensis (strain DSM 17950 / CFBP 7177 / CIP 109463 / NCPPB 4357 / Et1/99)
Q7N1U3 9.43e-44 140 68 0 92 3 plu3376 UPF0125 protein plu3376 Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)
A7MHX8 1.1e-42 137 64 0 94 3 rnfH Protein RnfH Cronobacter sakazakii (strain ATCC BAA-894)
B4F063 6.79e-41 133 64 1 98 3 rnfH Protein RnfH Proteus mirabilis (strain HI4320)
B5XVJ5 5.66e-40 130 63 0 92 3 rnfH Protein RnfH Klebsiella pneumoniae (strain 342)
B7LUV6 1.48e-39 129 63 0 92 3 rnfH Protein RnfH Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
B1LPC5 1.81e-39 129 63 0 92 3 rnfH Protein RnfH Escherichia coli (strain SMS-3-5 / SECEC)
B7N6K3 1.81e-39 129 63 0 92 3 rnfH Protein RnfH Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
B7NSB6 1.81e-39 129 63 0 92 3 rnfH Protein RnfH Escherichia coli O7:K1 (strain IAI39 / ExPEC)
Q83K06 2.71e-39 129 60 0 95 3 rnfH Protein RnfH Shigella flexneri
A8GI44 3.33e-39 128 61 0 94 3 rnfH Protein RnfH Serratia proteamaculans (strain 568)
A7FKS6 6.15e-39 127 64 0 94 3 rnfH Protein RnfH Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
B2TYP0 6.45e-39 127 61 0 92 3 rnfH Protein RnfH Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
B6I639 6.45e-39 127 61 0 92 3 rnfH Protein RnfH Escherichia coli (strain SE11)
B1IVL6 6.45e-39 127 61 0 92 3 rnfH Protein RnfH Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
A8A3C4 6.45e-39 127 61 0 92 3 rnfH Protein RnfH Escherichia coli O9:H4 (strain HS)
B1XBT8 6.45e-39 127 61 0 92 3 rnfH Protein RnfH Escherichia coli (strain K12 / DH10B)
C4ZYN5 6.45e-39 127 61 0 92 3 rnfH Protein RnfH Escherichia coli (strain K12 / MC4100 / BW2952)
B7M987 6.45e-39 127 61 0 92 3 rnfH Protein RnfH Escherichia coli O8 (strain IAI1)
B7LDK6 6.45e-39 127 61 0 92 3 rnfH Protein RnfH Escherichia coli (strain 55989 / EAEC)
A7ZQ58 6.45e-39 127 61 0 92 3 rnfH Protein RnfH Escherichia coli O139:H28 (strain E24377A / ETEC)
P52119 6.45e-39 127 61 0 92 1 ratB UPF0125 protein RatB Escherichia coli (strain K12)
P0A2L7 1.01e-38 127 64 0 92 3 yfjF UPF0125 protein YfjF Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2L8 1.01e-38 127 64 0 92 3 yfjF UPF0125 protein YfjF Salmonella typhi
B4TS65 1.01e-38 127 64 0 92 3 rnfH Protein RnfH Salmonella schwarzengrund (strain CVM19633)
B4T2C3 1.01e-38 127 64 0 92 3 rnfH Protein RnfH Salmonella newport (strain SL254)
B4TE61 1.01e-38 127 64 0 92 3 rnfH Protein RnfH Salmonella heidelberg (strain SL476)
B5RD94 1.01e-38 127 64 0 92 3 rnfH Protein RnfH Salmonella gallinarum (strain 287/91 / NCTC 13346)
B5QUH3 1.01e-38 127 64 0 92 3 rnfH Protein RnfH Salmonella enteritidis PT4 (strain P125109)
B5FS17 1.01e-38 127 64 0 92 3 rnfH Protein RnfH Salmonella dublin (strain CT_02021853)
Q57L20 1.01e-38 127 64 0 92 3 rnfH Protein RnfH Salmonella choleraesuis (strain SC-B67)
B5F298 1.01e-38 127 64 0 92 3 rnfH Protein RnfH Salmonella agona (strain SL483)
Q0TEM2 1.77e-38 127 61 0 92 3 rnfH Protein RnfH Escherichia coli O6:K15:H31 (strain 536 / UPEC)
B7MIV5 1.77e-38 127 61 0 92 3 rnfH Protein RnfH Escherichia coli O45:K1 (strain S88 / ExPEC)
B7UH66 1.77e-38 127 61 0 92 3 rnfH Protein RnfH Escherichia coli O127:H6 (strain E2348/69 / EPEC)
Q8FEY5 1.77e-38 127 61 0 92 1 pasI Persistence and stress-resistance antitoxin PasI Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
A8ANF0 2.51e-38 126 60 0 94 3 rnfH Protein RnfH Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
P58318 2.54e-38 126 60 0 92 3 yfjF UPF0125 protein YfjF Escherichia coli O157:H7
B5Z235 2.54e-38 126 60 0 92 3 rnfH Protein RnfH Escherichia coli O157:H7 (strain EC4115 / EHEC)
C6D972 7.19e-38 125 63 0 90 3 rnfH Protein RnfH Pectobacterium carotovorum subsp. carotovorum (strain PC1)
B7MYQ6 7.44e-38 125 60 0 92 3 rnfH Protein RnfH Escherichia coli O81 (strain ED1a)
Q8ZH12 9.53e-38 125 63 0 94 3 YPO1103 UPF0125 protein YPO1103/y3077/YP_1053 Yersinia pestis
B1JG69 9.53e-38 125 63 0 94 3 rnfH Protein RnfH Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
A4TNV0 9.53e-38 125 63 0 94 3 rnfH Protein RnfH Yersinia pestis (strain Pestoides F)
Q1CFK8 9.53e-38 125 63 0 94 3 rnfH Protein RnfH Yersinia pestis bv. Antiqua (strain Nepal516)
A9R2E0 9.53e-38 125 63 0 94 3 rnfH Protein RnfH Yersinia pestis bv. Antiqua (strain Angola)
B2K8D9 9.53e-38 125 63 0 94 3 rnfH Protein RnfH Yersinia pseudotuberculosis serotype IB (strain PB1/+)
Q1CAH3 9.53e-38 125 63 0 94 3 rnfH Protein RnfH Yersinia pestis bv. Antiqua (strain Antiqua)
Q2NRZ8 9.63e-38 125 64 0 90 3 rnfH Protein RnfH Sodalis glossinidius (strain morsitans)
Q65V45 2.18e-37 124 57 0 98 3 rnfH Protein RnfH Mannheimia succiniciproducens (strain KCTC 0769BP / MBEL55E)
Q9CP88 1.07e-35 120 56 0 98 3 PM0166 UPF0125 protein PM0166 Pasteurella multocida (strain Pm70)
A6VPR2 2.19e-35 119 55 0 97 3 rnfH Protein RnfH Actinobacillus succinogenes (strain ATCC 55618 / DSM 22257 / CCUG 43843 / 130Z)
A5UA93 3.09e-35 119 57 1 99 3 rnfH Protein RnfH Haemophilus influenzae (strain PittEE)
P43994 4.84e-35 118 57 1 99 1 HI_0395 UPF0125 protein HI_0395 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
A5UGR1 4.84e-35 118 57 1 99 3 rnfH Protein RnfH Haemophilus influenzae (strain PittGG)
Q4QNE7 4.84e-35 118 57 1 99 1 rnfH Protein RnfH Haemophilus influenzae (strain 86-028NP)
Q7VKP5 4.12e-33 113 58 0 94 3 HD_1828 UPF0125 protein HD_1828 Haemophilus ducreyi (strain 35000HP / ATCC 700724)
Q15V26 2.45e-31 109 58 1 94 3 rnfH Protein RnfH Pseudoalteromonas atlantica (strain T6c / ATCC BAA-1087)
P0C6P8 1.71e-30 107 60 0 89 3 VC_0850 UPF0125 protein VC_0850 Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
A5F377 1.71e-30 107 60 0 89 3 VC0395_A0376 UPF0125 protein VC0395_A0376/VC395_0866 Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
Q7MN97 7.74e-30 105 59 0 89 3 VV0820 UPF0125 protein VV0820 Vibrio vulnificus (strain YJ016)
Q8DF55 7.74e-30 105 59 0 89 3 VV1_0369 UPF0125 protein VV1_0369 Vibrio vulnificus (strain CMCP6)
Q87RY0 1.36e-29 105 59 0 89 3 VP0646 UPF0125 protein VP0646 Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
C4L8Z0 1.07e-26 97 57 0 89 3 rnfH Protein RnfH Tolumonas auensis (strain DSM 9187 / NBRC 110442 / TA 4)
C1D4H9 1.17e-26 97 51 0 95 3 rnfH Protein RnfH Laribacter hongkongensis (strain HLHK9)
A2SB99 1.43e-25 94 49 0 89 3 rnfH Protein RnfH Burkholderia mallei (strain NCTC 10229)
A1SV86 3.05e-25 93 54 0 92 3 rnfH Protein RnfH Psychromonas ingrahamii (strain DSM 17664 / CCUG 51855 / 37)
Q7NSG4 5.33e-25 92 47 0 94 3 CV_3462 UPF0125 protein CV_3462 Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / CCUG 213 / NBRC 12614 / NCIMB 9131 / NCTC 9757 / MK)
P57341 8.95e-25 92 45 0 97 3 BU253 UPF0125 protein BU253 Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
B8D7F0 1.24e-24 92 45 0 97 3 rnfH Protein RnfH Buchnera aphidicola subsp. Acyrthosiphon pisum (strain Tuc7)
B8D946 2.12e-24 91 45 0 97 3 rnfH Protein RnfH Buchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A)
Q603I8 2.95e-23 88 51 0 85 3 rnfH Protein RnfH Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath)
B6EKA7 7.73e-23 87 53 0 83 3 rnfH Protein RnfH Aliivibrio salmonicida (strain LFI1238)
Q3IE34 7.9e-23 87 46 0 89 3 rnfH Protein RnfH Pseudoalteromonas translucida (strain TAC 125)
Q8K9R6 8.91e-23 87 46 0 90 3 BUsg_244 UPF0125 protein BUsg_244 Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
B2JIA4 5.3e-22 85 41 0 91 3 rnfH Protein RnfH Paraburkholderia phymatum (strain DSM 17167 / CIP 108236 / LMG 21445 / STM815)
Q13XD8 8.38e-22 85 47 0 88 3 rnfH Protein RnfH Paraburkholderia xenovorans (strain LB400)
P67259 3.33e-21 83 44 0 87 3 NMB0796 UPF0125 protein NMB0796 Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)
P67258 3.33e-21 83 44 0 87 3 NMA1005 UPF0125 protein NMA1005 Neisseria meningitidis serogroup A / serotype 4A (strain DSM 15465 / Z2491)
A1KT54 3.33e-21 83 44 0 87 3 rnfH Protein RnfH Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / DSM 15464 / FAM18)
A9M3M8 3.33e-21 83 44 0 87 3 rnfH Protein RnfH Neisseria meningitidis serogroup C (strain 053442)
A4XYG1 1.84e-20 81 43 1 97 3 rnfH Protein RnfH Pseudomonas mendocina (strain ymp)
A1WX38 2.84e-20 80 45 0 82 3 rnfH Protein RnfH Halorhodospira halophila (strain DSM 244 / SL1)
B4RK79 2.99e-20 80 43 0 87 3 rnfH Protein RnfH Neisseria gonorrhoeae (strain NCCP11945)
Q5F9L3 2.99e-20 80 43 0 87 3 rnfH Protein RnfH Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090)
Q2W402 1.37e-19 79 46 0 82 3 rnfH Protein RnfH Paramagnetospirillum magneticum (strain ATCC 700264 / AMB-1)
Q83C31 1.66e-19 79 46 0 93 3 CBU_1303 UPF0125 protein CBU_1303 Coxiella burnetii (strain RSA 493 / Nine Mile phase I)
A9KGA1 1.66e-19 79 46 0 93 3 rnfH Protein RnfH Coxiella burnetii (strain Dugway 5J108-111)
B6IZH9 1.66e-19 79 46 0 93 3 rnfH Protein RnfH Coxiella burnetii (strain CbuG_Q212)
Q02FQ6 2.02e-19 79 41 1 94 3 rnfH Protein RnfH Pseudomonas aeruginosa (strain UCBPP-PA14)
O68561 2.2e-19 78 41 1 94 3 PA4766 UPF0125 protein PA4766 Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
B7V1H8 2.2e-19 78 41 1 94 3 rnfH Protein RnfH Pseudomonas aeruginosa (strain LESB58)
Q470F9 4.94e-19 78 46 2 89 3 rnfH Protein RnfH Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197)
B6J7V9 5.63e-19 77 45 0 93 3 rnfH Protein RnfH Coxiella burnetii (strain CbuK_Q154)
Q4KIH6 6.72e-19 77 51 1 83 3 rnfH Protein RnfH Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5)
Q2SMN3 1.42e-18 76 40 1 91 3 rnfH Protein RnfH Hahella chejuensis (strain KCTC 2396)
A9N8I3 3.02e-18 75 45 0 93 3 rnfH Protein RnfH Coxiella burnetii (strain RSA 331 / Henzerling II)
A6VCM3 7.42e-18 74 40 1 89 3 rnfH Protein RnfH Pseudomonas aeruginosa (strain PA7)
Q0VSU3 1.34e-17 74 41 1 98 3 rnfH Protein RnfH Alcanivorax borkumensis (strain ATCC 700651 / DSM 11573 / NCIMB 13689 / SK2)
Q87WN4 1.99e-17 73 43 1 97 3 PSPTO_4512 UPF0125 protein PSPTO_4512 Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000)
Q3KIA5 3.78e-17 73 49 1 83 3 rnfH Protein RnfH Pseudomonas fluorescens (strain Pf0-1)
Q8EGW6 2.77e-16 71 40 0 87 3 SO_1475 UPF0125 protein SO_1475 Shewanella oneidensis (strain ATCC 700550 / JCM 31522 / CIP 106686 / LMG 19005 / NCIMB 14063 / MR-1)
Q1IF64 4.24e-16 70 42 1 84 3 rnfH Protein RnfH Pseudomonas entomophila (strain L48)
Q3IXC0 1.23e-14 66 40 0 83 3 rnfH Protein RnfH Cereibacter sphaeroides (strain ATCC 17023 / DSM 158 / JCM 6121 / CCUG 31486 / LMG 2827 / NBRC 12203 / NCIMB 8253 / ATH 2.4.1.)
Q48E57 1.64e-14 66 45 1 83 3 rnfH Protein RnfH Pseudomonas savastanoi pv. phaseolicola (strain 1448A / Race 6)
A3PRP9 2.26e-14 65 40 0 83 3 rnfH Protein RnfH Cereibacter sphaeroides (strain ATCC 17029 / ATH 2.4.9)
Q4ZNP2 1.22e-13 64 47 2 87 3 rnfH Protein RnfH Pseudomonas syringae pv. syringae (strain B728a)
Q9F5Y0 4.72e-13 62 42 0 73 1 rnfH Protein RnfH Azotobacter vinelandii (strain DJ / ATCC BAA-1303)
P57111 1.22e-12 61 38 0 75 3 rnfH Protein RnfH Stutzerimonas stutzeri
P97056 6.6e-11 56 38 1 84 3 rnfH Protein RnfH Rhodobacter capsulatus
Q89AN0 8.83e-09 51 31 1 85 3 bbp_234 UPF0125 protein bbp_234 Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
Q87BS2 2.79e-06 44 50 0 40 3 PD_1376 UPF0125 protein PD_1376 Xylella fastidiosa (strain Temecula1 / ATCC 700964)
Q9PAZ9 1.49e-05 42 47 0 40 3 XF_2346 UPF0125 protein XF_2346 Xylella fastidiosa (strain 9a5c)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS01870
Feature type CDS
Gene -
Product RnfH family protein
Location 409354 - 409653 (strand: -1)
Length 300 (nucleotides) / 99 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2336
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF03658 RnfH family Ubiquitin

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2914 Defense mechanisms (V) V Putative antitoxin component PasI (RatB) of the RatAB toxin-antitoxin module, ubiquitin-RnfH superfamily

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K09801 uncharacterized protein - -

Protein Sequence

MSDISIEVCYALPEKQFLIPVKIPQGSTVEAGILASGILALRNELDLSQNKVGIFSRPVKLTDTVNDGDRIEIYRPLTADPKEMRRKRAEEASRRKKES

Flanking regions ( +/- flanking 50bp)

GGCCGGTAATATGGTGATGGCATTTACCCGCAGGGCAAAAGAGGTTTACAGTGTCTGATATATCTATCGAGGTTTGTTATGCATTACCGGAGAAACAATTTCTGATCCCGGTAAAGATCCCGCAAGGATCGACAGTTGAAGCCGGTATTCTTGCATCCGGTATTTTAGCATTACGTAATGAACTGGATTTATCACAAAATAAAGTCGGTATTTTCAGCCGTCCGGTAAAACTAACCGATACGGTTAATGACGGTGACCGCATTGAAATATATCGCCCGCTGACAGCTGACCCGAAAGAAATGCGCAGAAAGCGTGCAGAAGAAGCCAGCCGCCGGAAGAAAGAGAGCTGATATACTCTTCATACTTCAAAATACCCGGAATATAAAAACCGTACCTGATA