Homologs in group_3060

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_18310 FBDBKF_18310 91.2 Morganella morganii S1 codB Purine-cytosine permease or related protein
EHELCC_18345 EHELCC_18345 91.2 Morganella morganii S2 codB Purine-cytosine permease or related protein
NLDBIP_18270 NLDBIP_18270 91.2 Morganella morganii S4 codB Purine-cytosine permease or related protein
LHKJJB_18465 LHKJJB_18465 91.2 Morganella morganii S3 codB Purine-cytosine permease or related protein
HKOGLL_18200 HKOGLL_18200 91.2 Morganella morganii S5 codB Purine-cytosine permease or related protein

Distribution of the homologs in the orthogroup group_3060

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3060

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AA82 3.66e-29 122 27 11 454 1 codB Cytosine permease Escherichia coli (strain K12)
P0AA83 3.66e-29 122 27 11 454 3 codB Cytosine permease Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q8X691 4.53e-29 121 27 11 454 3 codB Cytosine permease Escherichia coli O157:H7
D6R8X8 4.96e-08 58 25 11 360 1 hyuP Hydantoin permease Microbacterium liquefaciens

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS01820
Feature type CDS
Gene -
Product cytosine permease
Location 398917 - 400326 (strand: -1)
Length 1410 (nucleotides) / 469 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3060
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1457 Nucleotide transport and metabolism (F) F Purine-cytosine permease or related protein

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K10974 cytosine permease - -

Protein Sequence

MSKQDTPHAPQTHDSDFMFTPIPMTHRRETWKQILVWIGFGYVATGLFIGGALAGANGGPGMSFPMALLAIAIGMGLLFILTSLLGVMAQRTGLSLALLSRFSYGYLGSNLPMIAMGLLTLGWFAAITGMVGDIWGSFLGNPSGIIVFDPGAHGYNGAPITLEIFISCVVAGLLFTYTSLHGMKGLEIIAIPVSPIIMIIAVVTGYAMLQEGGGLSVFIENSNRNEGLMLSTAITMVVGSWIAGAVMGVDLFRFNKSISAVFWGSAACFIFTNPLLNVVGYIGTMTVGMPNYVTWMIEKSFLLALLGVVTWTLSLWTTNDAELYCNSLYTGPVLDSVGIKVNKNILILSTGILGTVLGAIGFYQIFFADFINYLGIMAPPLAGPLLADYYVTRRCKYDISQINSQPKCNYAGVISALAGMASGLIMAMNNILSDWPTGLLALAFTIILYLILHPLLAAKAASPAAGRSS

Flanking regions ( +/- flanking 50bp)

CAACATTTACCGGCAACATGCCAACACAACACGGGATAAGGAAAAACACAATGAGCAAACAAGACACCCCACATGCGCCGCAAACGCATGACAGTGATTTTATGTTTACCCCCATACCCATGACTCACCGCCGGGAGACCTGGAAACAGATCCTTGTGTGGATAGGGTTTGGTTATGTCGCCACCGGACTTTTTATCGGCGGCGCACTGGCGGGTGCCAACGGCGGACCGGGGATGTCGTTCCCGATGGCGCTGCTGGCAATAGCCATCGGCATGGGATTGTTATTTATTCTCACCTCCCTGCTCGGCGTCATGGCACAGCGTACCGGTCTGAGCCTGGCGCTTCTGAGTCGTTTTTCATACGGTTATCTGGGATCTAACCTACCGATGATCGCGATGGGGCTGCTGACACTCGGCTGGTTTGCCGCGATCACCGGGATGGTCGGCGATATCTGGGGATCGTTTCTGGGCAATCCCAGCGGGATAATTGTCTTTGATCCGGGCGCACACGGCTATAACGGCGCGCCTATCACACTGGAAATTTTTATCTCCTGTGTGGTCGCCGGATTGTTATTTACTTACACCTCACTTCACGGCATGAAAGGACTGGAAATTATCGCCATTCCTGTTTCGCCGATCATTATGATTATTGCCGTGGTAACCGGCTATGCGATGTTACAGGAGGGCGGCGGGTTATCTGTCTTTATTGAGAATTCCAACCGCAATGAAGGGCTGATGCTGTCAACGGCGATCACTATGGTTGTCGGCAGCTGGATTGCCGGTGCCGTGATGGGTGTGGATCTGTTCCGTTTTAATAAAAGTATTTCTGCGGTTTTCTGGGGATCAGCCGCCTGTTTTATTTTTACCAATCCGCTGCTCAATGTGGTCGGGTATATCGGCACGATGACTGTCGGAATGCCGAACTATGTTACCTGGATGATTGAAAAAAGCTTTCTGCTGGCGCTGCTCGGCGTTGTCACCTGGACACTGTCTCTGTGGACCACCAACGACGCAGAGCTGTACTGTAACTCACTGTATACCGGCCCGGTGCTGGACTCTGTGGGTATTAAAGTCAATAAAAACATTCTGATACTGTCAACCGGGATCCTCGGCACTGTATTGGGTGCTATTGGCTTTTACCAGATATTCTTTGCTGATTTTATTAATTATCTCGGCATTATGGCGCCGCCACTCGCCGGTCCTTTGCTGGCTGATTACTATGTCACCCGCAGATGTAAATATGATATCAGCCAGATTAACAGTCAGCCGAAATGCAATTACGCAGGCGTGATAAGCGCCCTGGCGGGGATGGCTTCAGGGCTGATTATGGCAATGAATAATATTCTGTCTGACTGGCCTACCGGCTTGTTAGCCCTGGCGTTTACCATCATCCTTTATCTGATTCTGCACCCGTTACTGGCTGCAAAAGCTGCATCACCGGCAGCAGGGAGATCATCATGAAAAAAGTTGTTCTAAATGAGTTCAATACCGGAGAATTAAAAACATTGTTC