Homologs in group_3063

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_18310 FBDBKF_18310 100.0 Morganella morganii S1 codB Purine-cytosine permease or related protein
NLDBIP_18270 NLDBIP_18270 100.0 Morganella morganii S4 codB Purine-cytosine permease or related protein
LHKJJB_18465 LHKJJB_18465 100.0 Morganella morganii S3 codB Purine-cytosine permease or related protein
HKOGLL_18200 HKOGLL_18200 100.0 Morganella morganii S5 codB Purine-cytosine permease or related protein
F4V73_RS01820 F4V73_RS01820 91.2 Morganella psychrotolerans - cytosine permease

Distribution of the homologs in the orthogroup group_3063

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3063

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AA82 1.55e-30 125 27 11 457 1 codB Cytosine permease Escherichia coli (strain K12)
P0AA83 1.55e-30 125 27 11 457 3 codB Cytosine permease Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q8X691 1.7e-30 125 27 11 457 3 codB Cytosine permease Escherichia coli O157:H7
D6R8X8 1.49e-06 54 23 12 366 1 hyuP Hydantoin permease Microbacterium liquefaciens
P94575 0.000417 46 22 15 471 2 pucI Allantoin permease Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_18345
Feature type CDS
Gene codB
Product Purine-cytosine permease or related protein
Location 25668 - 27074 (strand: -1)
Length 1407 (nucleotides) / 468 (amino acids)
In genomic island -

Contig

Accession ZDB_236
Length 34990 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3063
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1457 Nucleotide transport and metabolism (F) F Purine-cytosine permease or related protein

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K10974 cytosine permease - -

Protein Sequence

MSKHETSSAPPAHDHDFMFTPIPMTHRRETWKQVLVWIGFGYVATGLFIGGALAGANGGPGMSFPMALLAIAIGMGLLFILTSLLGIMAQRTGLSLALISRFSYGRFGANLPMIAMGLLTLGWFAAITGMVGDIWGTFLGNPSGIIVFNPAEHGYSGAPITLEVFLSCVVAGLLFTYTSLHGMKGLEIIAIPVSPIIMIIAVITGYAMLQEGGGLSVFIENSNRNEGLMLSTAITMVVGSWIAGAVMGVDLFRFNKSISAVFWGSAACFIFTNPLLNVVGYIGTMTVGMPNYITWMIEKSFLLALIGVITWTLSLWTTNDAELYCNSLYTGPVLDSVGVKVNKNVLILTTGIIGTVLGAIGFYQIFFADFINYLGIMAPPLAGPLLADYYITRKCRYDITQINSQPKYNYAGVISALAGMASGLVMALNNILSDWPTGLLALVITVIIYLILHPLLAAKATSPATGRS

Flanking regions ( +/- flanking 50bp)

AAACACCTTTAGCGGCAACTGCCAACACCACGTAAGACAGGGGAAACACCATGAGCAAACACGAAACGTCATCCGCGCCTCCGGCGCATGACCACGATTTTATGTTTACGCCCATACCGATGACACACCGCCGCGAGACCTGGAAACAGGTGCTGGTCTGGATAGGTTTCGGTTATGTGGCAACCGGGTTATTTATCGGCGGCGCCCTGGCCGGGGCCAACGGCGGGCCGGGAATGTCATTTCCGATGGCGCTGCTGGCTATCGCCATCGGGATGGGATTGTTGTTTATTCTCACCTCGCTGCTCGGCATTATGGCGCAGCGCACCGGGCTGAGCCTGGCGCTGATCAGCCGTTTTTCCTATGGCCGTTTCGGCGCAAACCTGCCGATGATTGCTATGGGGCTGCTGACCCTCGGCTGGTTTGCGGCGATAACCGGGATGGTCGGGGATATCTGGGGCACGTTCCTGGGCAACCCCAGCGGGATCATCGTCTTTAACCCGGCGGAGCACGGCTACAGCGGTGCGCCGATCACCCTGGAAGTCTTTCTTTCCTGTGTCGTCGCCGGCCTGCTGTTTACGTACACCTCACTGCACGGCATGAAAGGACTGGAAATTATCGCTATTCCGGTATCGCCGATTATTATGATTATCGCCGTGATCACCGGCTATGCCATGTTGCAGGAAGGCGGCGGATTATCCGTCTTTATTGAGAATTCCAACCGCAATGAAGGGCTGATGCTCTCCACCGCGATCACGATGGTGGTCGGCAGCTGGATTGCCGGAGCAGTGATGGGCGTGGATCTATTCCGCTTTAATAAGAGTATTTCTGCGGTATTCTGGGGATCGGCAGCCTGTTTTATCTTCACCAACCCGCTGCTCAATGTGGTCGGTTATATCGGCACCATGACGGTCGGGATGCCGAACTACATTACCTGGATGATCGAGAAAAGCTTCCTGCTGGCGTTGATCGGGGTGATCACCTGGACACTGTCACTGTGGACCACCAACGACGCGGAACTCTACTGTAACTCGCTCTATACCGGACCGGTGCTGGATTCCGTTGGTGTGAAAGTCAATAAAAACGTCCTGATTCTGACCACCGGGATTATCGGTACTGTGCTGGGCGCTATCGGTTTTTACCAGATCTTCTTTGCTGATTTTATTAACTATCTCGGCATTATGGCACCGCCGCTGGCCGGGCCGCTGCTGGCGGATTACTACATCACCCGCAAATGCCGCTACGACATCACACAGATTAACAGTCAGCCGAAATACAATTACGCCGGAGTGATCAGTGCGCTGGCCGGGATGGCTTCCGGTCTGGTGATGGCACTGAACAATATTCTGTCTGACTGGCCGACCGGCCTGCTGGCATTAGTTATTACCGTTATTATTTATCTGATATTGCATCCGCTGCTGGCGGCAAAAGCCACCTCACCGGCCACAGGGAGATCATAATGAAAAAAGTTTATCTTAATGAATTTACGACTGAAGAGCTGAAAAACCGG