Homologs in group_3057

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_18270 FBDBKF_18270 92.9 Morganella morganii S1 yjiL Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain)
EHELCC_18305 EHELCC_18305 92.9 Morganella morganii S2 yjiL Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain)
NLDBIP_18230 NLDBIP_18230 92.9 Morganella morganii S4 yjiL Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain)
LHKJJB_18425 LHKJJB_18425 92.9 Morganella morganii S3 yjiL Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain)
HKOGLL_18160 HKOGLL_18160 92.9 Morganella morganii S5 yjiL Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain)

Distribution of the homologs in the orthogroup group_3057

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3057

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P39383 2.59e-119 344 68 1 250 4 yjiL Uncharacterized protein YjiL Escherichia coli (strain K12)
Q93AM0 1.73e-59 192 39 3 261 1 fldI (R)-phenyllactate dehydratase activator Clostridium sporogenes
Q5U925 1.64e-57 187 40 5 264 1 hadI 2-hydroxyisocaproyl-CoA dehydratase activator Clostridioides difficile
G3KIM5 2.72e-56 184 41 4 263 1 lcdC Activator of lactoyl-CoA dehydratase (Fragment) Anaerotignum propionicum
P11568 1.73e-55 182 43 5 250 1 hgdC (R)-2-hydroxyglutaryl-CoA dehydratase activating ATPase Acidaminococcus fermentans (strain ATCC 25085 / DSM 20731 / CCUG 9996 / CIP 106432 / VR4)
Q60315 2.36e-42 147 36 3 247 4 MJ0004 Uncharacterized protein MJ0004 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
O87877 1.13e-33 126 33 8 274 1 bcrD Benzoyl-CoA reductase subunit D Thauera aromatica
O87876 4.24e-30 120 33 4 206 1 bcrA Benzoyl-CoA reductase subunit A Thauera aromatica
Q58210 1.21e-14 76 29 11 263 4 MJ0800 Uncharacterized protein MJ0800 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS01795
Feature type CDS
Gene -
Product acyl-CoA dehydratase activase
Location 395284 - 396087 (strand: 1)
Length 804 (nucleotides) / 267 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3057
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF01869 BadF/BadG/BcrA/BcrD ATPase family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1924 Lipid transport and metabolism (I) I Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain)

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K23876 (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9] - -

Protein Sequence

MLSIGIDSGSTATKGILFSDENGGKILRRFLIPTPFKPQSAILEAWDTLCGECDSPPFLTLTGYGRKLADFADKQVTEISCHGIGARWLHPQTRTVIDIGGQDSKVIRLDEQGHLTDFLMNDKCAAGTGRFLDVISRTLGTDITAVDDTIRGIEPHAISSMCTVFAESEVISLRSAGVDPETILSGIVNSMAQRTAGFAKRLSTVPAVLFSGGVSRSQVFCERLSQHLGAEVITHPDGQFAGAIGAAIYGLRQLQKQGAKPAEASIL

Flanking regions ( +/- flanking 50bp)

GCTTGCAACCCGTATTGCCGCCTTTATTGAAATGTTATAAGGGGGCAGCAATGCTGAGTATTGGTATTGATTCCGGCTCTACTGCAACAAAAGGTATTCTGTTCAGTGATGAAAACGGCGGGAAGATCCTGCGCCGTTTTCTTATTCCGACGCCTTTCAAACCACAGTCGGCTATCCTGGAAGCCTGGGATACATTGTGCGGTGAGTGTGATTCACCTCCGTTTCTTACTCTGACCGGATACGGGCGGAAACTGGCTGATTTTGCCGATAAACAGGTTACGGAGATCTCCTGTCACGGAATAGGCGCGCGCTGGTTGCACCCGCAGACGCGGACGGTGATTGATATCGGCGGGCAGGACAGCAAAGTTATCCGCCTGGATGAACAGGGGCATCTCACTGATTTTCTGATGAATGACAAATGTGCCGCCGGAACCGGGCGTTTTCTGGATGTTATAAGCCGGACGCTGGGAACCGACATCACCGCTGTTGATGATACTATCCGGGGTATTGAGCCACATGCTATTTCCAGCATGTGTACAGTTTTTGCTGAATCGGAAGTGATCAGTCTGCGATCAGCGGGCGTTGACCCTGAGACTATTCTGTCAGGCATTGTTAATTCAATGGCACAACGTACAGCCGGGTTTGCCAAGCGCCTGAGTACTGTTCCCGCGGTATTATTCAGCGGCGGAGTCAGCCGCAGTCAGGTCTTTTGTGAGCGGCTGTCACAGCATCTGGGGGCAGAGGTTATCACTCATCCTGACGGACAATTCGCGGGGGCTATCGGCGCAGCGATTTACGGGCTGCGGCAATTGCAGAAACAGGGAGCAAAACCGGCGGAGGCATCCATTCTGTGAATGATTATTTGATCCTGTTTGACAACATGCTGGGGGTGGTGGCAATGCGC