COG1924


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1924, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain)
Function(s) descr. Lipid transport and metabolism (I)

Occurence in the database

COG1924 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_3057 FBDBKF_18270 17740 18543 1 yjiL Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) Morganella morganii S1
1 group_3057 EHELCC_18305 17613 18416 1 yjiL Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) Morganella morganii S2
2 group_3057 NLDBIP_18230 17814 18617 1 yjiL Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) Morganella morganii S4
3 group_3057 LHKJJB_18425 17652 18455 1 yjiL Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) Morganella morganii S3
4 group_3057 HKOGLL_18160 17630 18433 1 yjiL Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) Morganella morganii S5
5 group_3057 F4V73_RS01795 395284 396087 1 acyl-CoA dehydratase activase Morganella psychrotolerans