Homologs in group_3129

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_20050 FBDBKF_20050 81.9 Morganella morganii S1 fimH Pilin (type 1 fimbrial protein)
EHELCC_03480 EHELCC_03480 81.9 Morganella morganii S2 fimH Pilin (type 1 fimbrial protein)
NLDBIP_03480 NLDBIP_03480 81.9 Morganella morganii S4 fimH Pilin (type 1 fimbrial protein)
LHKJJB_09310 LHKJJB_09310 81.9 Morganella morganii S3 fimH Pilin (type 1 fimbrial protein)
HKOGLL_09665 HKOGLL_09665 81.9 Morganella morganii S5 fimH Pilin (type 1 fimbrial protein)

Distribution of the homologs in the orthogroup group_3129

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3129

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P37925 2.46e-137 395 58 2 333 3 fimH Type 1 fimbrin D-mannose specific adhesin Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P75715 1.18e-112 333 50 1 314 2 sfmH Uncharacterized fimbrial-like protein SfmH Escherichia coli (strain K12)
Q8X5K9 6.55e-17 84 26 3 186 2 lpfD Probable minor fimbrial subunit LpfD Escherichia coli O157:H7
P43663 2.21e-16 82 28 3 195 3 lpfD Protein LpfD Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P75858 3.05e-15 79 25 8 283 2 elfG Uncharacterized fimbrial-like protein ElfG Escherichia coli (strain K12)
P43319 4e-12 69 27 8 210 2 yraK Uncharacterized fimbrial-like protein YraK Escherichia coli (strain K12)
Q8XDC9 2.26e-08 58 25 7 234 2 elfG Uncharacterized fimbrial-like protein ElfG Escherichia coli O157:H7

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS01670
Feature type CDS
Gene -
Product fimbrial protein
Location 365853 - 366851 (strand: -1)
Length 999 (nucleotides) / 332 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3129
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF00419 Fimbrial protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3539 Cell motility (N) N Pilin (type 1 fimbrial protein)

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07350 minor fimbrial subunit - -

Virulence factor Annotation(s)

VF gene ID Protein VF ID Category
VFG042683 fimbrial adhesin subunit VF1211 Adherence

Protein Sequence

MKKIYWAPLLMTFLPLPALAVVCSNASGGVGEVYYDLSKSFSSANNQVGQVVQMAKNFTERVDGVCPVHKGNSTTMRSYVANTPVVETEGKYKYLKLNDYLIGAMSITDSYSGTFYPPQEYVQMGMHPNVVLGKPFGIQDSNFVFRLKVTRRFVDQVVIPKKTLFTVYVTTNYGEALSTPVYTISYSGNINVPQNCKIGVNDIVVIDFGKIGSQLFSQAGAGNKPDGVNKKTENIAIQCTNVEAKAYLTLRIEAEKVQGKMIVSDNPDVGFMVGDSSGNALTPNNISSLIPFQLDGTGASRTTITAWPVSVTGNKPKEGRFQSRGYLRVDYQ

Flanking regions ( +/- flanking 50bp)

AAACGGGCCGTTACTCCGTGCAGCGCTTGAATGTAAATAGAGAGTTAATGATGAAAAAAATATACTGGGCTCCGTTATTAATGACATTTTTACCTCTCCCTGCGCTGGCGGTGGTATGCAGCAATGCATCCGGCGGAGTCGGTGAAGTTTATTATGACCTGTCAAAAAGCTTTTCTTCAGCAAATAACCAGGTCGGGCAGGTAGTGCAAATGGCCAAAAACTTTACTGAGCGGGTCGACGGTGTATGTCCGGTGCATAAAGGAAACAGTACCACTATGCGAAGCTATGTGGCAAATACCCCCGTGGTGGAAACGGAAGGAAAATATAAATATCTGAAGCTCAATGATTATCTGATTGGTGCAATGAGCATCACTGACAGTTATTCAGGGACATTTTATCCGCCGCAGGAATATGTTCAGATGGGAATGCACCCTAACGTGGTATTAGGAAAACCGTTCGGGATTCAGGACAGCAACTTTGTTTTCCGTCTGAAAGTCACCCGCCGTTTTGTTGACCAGGTTGTCATTCCGAAGAAAACACTCTTTACCGTGTATGTCACCACAAATTATGGCGAGGCATTAAGTACGCCTGTTTATACCATCAGTTACAGCGGTAATATTAATGTTCCGCAAAACTGTAAAATTGGCGTGAACGATATTGTTGTTATAGATTTTGGTAAAATTGGCTCTCAGCTTTTCAGTCAGGCCGGCGCCGGTAATAAGCCTGATGGTGTAAATAAGAAAACAGAAAATATCGCGATTCAGTGTACGAATGTCGAAGCAAAAGCCTATCTGACATTACGTATTGAAGCTGAAAAAGTTCAGGGGAAAATGATTGTCTCGGATAATCCGGATGTCGGATTTATGGTCGGTGACAGCAGCGGCAACGCATTAACACCAAATAATATCAGTAGCCTTATCCCTTTCCAGCTTGACGGCACTGGCGCCTCCCGTACAACTATTACTGCCTGGCCCGTTAGTGTTACGGGAAATAAACCGAAAGAAGGCAGATTTCAATCCCGTGGTTATTTACGCGTTGACTATCAATAGGCCGGAAGATGAAAAAAATATTAAATCCGGTGTTACTGATAATCGCATCC