Homologs in group_3821

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1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
PMI_RS00265 PMI_RS00265 61.9 Proteus mirabilis HI4320 - type II toxin-antitoxin system HipA family toxin

Distribution of the homologs in the orthogroup group_3821

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3821

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P55412 5.09e-07 55 25 19 411 3 NGR_a04040 Putative kinase Y4dM Sinorhizobium fredii (strain NBRC 101917 / NGR234)
Q8EIX3 6.16e-06 52 25 13 277 1 hipA Serine/threonine-protein kinase toxin HipA Shewanella oneidensis (strain ATCC 700550 / JCM 31522 / CIP 106686 / LMG 19005 / NCIMB 14063 / MR-1)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS00970
Feature type CDS
Gene -
Product type II toxin-antitoxin system HipA family toxin
Location 205001 - 206296 (strand: 1)
Length 1296 (nucleotides) / 431 (amino acids)
In genomic island -

Contig

Accession NZ_VXKB01000001
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3821
Orthogroup size 2
N. genomes 2

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Genomic region

Domains

PF07804 HipA-like C-terminal domain
PF13657 HipA N-terminal domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3550 Signal transduction mechanisms (T) T Serine/threonine protein kinase HipA, toxin component of the HipAB toxin-antitoxin module

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07154 serine/threonine-protein kinase HipA [EC:2.7.11.1] - -

Protein Sequence

MDFKPVQKLTVMRTLSTGEETEAGTLVQNRTGVFFQYHSDYLNRFGNSSPLNLKDSTELQRAPGTPHDGLHGLFADSLPDGWGRLLQDRVFRQQEIALHNITAMDRLAFVGHRGMGALSYHPGADCQPENGEFVDLVTLGQDAQAVFEGETEHVLSALVAAGSSGGARPKAQLYFRPGNFSACSICDTPGSEAWLVKFTSSSLPLRHDEGLCEAVYLDLAGQAGLNPPQWRLIDTGTRGGAKAWLAVKRFDRTDNGADKRPGKLLMHSVCGLLDADFRIPSLDYDDLIRLNRMLCRSVSAGQLQFRRAVFNLLAANQDDHTKNWSFLQSDDGQWQAAPFYDVTYNPNRMNEHTTAFGGHGRTPPPDTMRHLAELAGFDNWETARQAIEEIADVVSGFPALAKDIGVSPQIRREIENTLIQRRQDNQRLFSV

Flanking regions ( +/- flanking 50bp)

TAAACGTGCAGAGGTGAAATTCCCGCAGACGATAGAAGAGGTACTGAAAGATGGATTTTAAGCCGGTTCAGAAGCTGACAGTGATGCGGACTTTGTCAACAGGGGAGGAAACCGAGGCCGGAACATTGGTACAGAACCGGACGGGCGTTTTTTTTCAGTATCACAGCGATTACCTGAATCGTTTCGGTAACAGTTCGCCGCTGAATCTGAAGGACAGCACCGAACTTCAGCGCGCTCCGGGCACTCCGCACGATGGATTACATGGCCTTTTTGCTGACAGTCTGCCTGATGGCTGGGGACGGCTGCTGCAGGACAGAGTATTCCGGCAGCAGGAGATCGCACTGCATAACATTACCGCAATGGACAGGCTGGCATTCGTCGGGCATCGCGGTATGGGGGCATTGTCTTATCATCCTGGAGCCGATTGTCAGCCGGAAAACGGGGAATTTGTTGATCTGGTGACCCTGGGACAGGATGCGCAGGCTGTTTTTGAGGGAGAAACAGAACATGTTTTATCTGCTCTGGTCGCTGCGGGAAGTTCCGGTGGAGCACGACCAAAAGCACAACTGTATTTCAGACCGGGCAATTTTTCTGCCTGCTCAATCTGCGATACACCAGGCAGTGAAGCCTGGCTGGTGAAATTTACCTCTTCATCTCTGCCGCTGAGGCATGATGAAGGGCTATGTGAGGCTGTCTATCTGGATCTTGCGGGACAGGCAGGGCTGAATCCGCCGCAATGGCGGCTTATTGATACCGGAACCCGGGGCGGAGCAAAAGCCTGGCTGGCGGTTAAACGCTTTGACAGGACGGATAACGGCGCAGATAAACGTCCCGGTAAGTTGCTGATGCACAGTGTGTGCGGGCTCCTGGATGCAGATTTCAGAATACCGTCACTGGATTATGACGATCTCATCCGTCTGAACAGGATGTTGTGCCGCTCTGTTTCTGCCGGACAACTGCAATTCAGGCGGGCGGTATTTAATTTACTGGCTGCGAATCAGGATGATCACACTAAAAACTGGTCTTTCCTGCAATCGGATGACGGTCAGTGGCAGGCGGCACCTTTCTATGATGTTACCTACAATCCGAACCGTATGAATGAACATACAACGGCATTTGGCGGGCATGGCAGAACACCACCGCCGGATACGATGAGACATCTGGCGGAGCTGGCCGGTTTTGATAACTGGGAAACTGCGCGGCAGGCGATCGAAGAAATTGCGGATGTTGTGTCCGGTTTTCCGGCGCTGGCAAAAGATATTGGCGTTTCACCGCAGATCAGGCGGGAAATTGAAAATACACTGATACAGCGGCGGCAGGATAATCAGCGTTTATTTTCTGTTTGAAAACGGTCGGTCTGAAAAAGTACTACCCAAAAAGAAACGGCAGTGAATCG