Homologs in group_1178

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_06795 FBDBKF_06795 78.3 Morganella morganii S1 yeiB DUF418 domain-containing protein
EHELCC_04175 EHELCC_04175 78.3 Morganella morganii S2 yeiB DUF418 domain-containing protein
NLDBIP_04175 NLDBIP_04175 78.3 Morganella morganii S4 yeiB DUF418 domain-containing protein
LHKJJB_10005 LHKJJB_10005 78.3 Morganella morganii S3 yeiB DUF418 domain-containing protein
HKOGLL_08970 HKOGLL_08970 78.3 Morganella morganii S5 yeiB DUF418 domain-containing protein
PMI_RS03155 PMI_RS03155 42.6 Proteus mirabilis HI4320 yeiB DUF418 domain-containing protein YeiB

Distribution of the homologs in the orthogroup group_1178

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1178

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P25747 9.67e-86 268 43 7 385 4 yeiB Uncharacterized protein YeiB Escherichia coli (strain K12)
P42107 9.71e-24 104 28 16 394 4 yxaH Uncharacterized protein YxaH Bacillus subtilis (strain 168)
P54442 2.07e-20 95 26 15 399 4 yrkO Uncharacterized protein YrkO Bacillus subtilis (strain 168)
P32819 9.9e-06 50 33 4 123 4 None Uncharacterized 39.9 kDa protein in amylase 3'region Bacillus acidopullulyticus
P32819 0.000139 47 32 1 79 4 None Uncharacterized 39.9 kDa protein in amylase 3'region Bacillus acidopullulyticus

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS00935
Feature type CDS
Gene yeiB
Product DUF418 domain-containing protein YeiB
Location 198330 - 199481 (strand: 1)
Length 1152 (nucleotides) / 383 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1178
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF04235 Protein of unknown function (DUF418)

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2311 Function unknown (S) S Uncharacterized membrane protein YeiB

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07148 uncharacterized protein - -

Protein Sequence

MNTSVSSAASRIDALDMIRGLAILGIFILNIAGFALPSAAYLNPLYDPAASASDVTTWAFLNVLVQGKFLGMFAVLFGATLMMLSRYSQPWNSARLLVLGIIGILHTALLWQGDILLVYSLTGIVACMIIRHVPSRWWKWLIPCLLLIGQFLLFFLLAENGELKLLYWQPSETMIAYETLTARVGGLAGVTDRLESISGMLLMLVIQYGWQLLALMLLGALLMKNGWLKGEYSLAHYRRLAGGILIPTLLLQAVVVWQVYLSGWSVFWLGSIGYPLSEILQPVQTVGLIALFYGLRPQLKPVSVYLQRVGRTALSSYLLQSVCGVIIFNYLGYFNQFDRLTLLAFVPVMWMINIVFSTLWLRYFSQGPVEWLWRQAANRLATR

Flanking regions ( +/- flanking 50bp)

GCCAGAATACCCGTCAGGAATTCCTGCGCGCTGCCCGTCATATTTAACTGATGAATACATCAGTCTCTTCTGCTGCATCACGCATTGACGCCCTCGATATGATCCGGGGGCTTGCTATCCTCGGGATTTTTATCCTTAATATTGCCGGTTTTGCTCTGCCGTCGGCGGCATATCTGAATCCGTTGTATGACCCCGCTGCATCTGCGTCGGATGTCACCACATGGGCATTTCTGAATGTGCTGGTGCAGGGCAAGTTTCTCGGCATGTTTGCCGTACTGTTCGGCGCCACATTAATGATGCTGAGCCGCTACAGTCAGCCGTGGAATTCTGCCCGGCTGCTGGTGCTGGGAATTATCGGCATACTGCATACGGCGTTGCTCTGGCAGGGCGATATCCTGCTGGTGTACAGTCTGACCGGCATTGTTGCCTGCATGATTATCCGCCATGTTCCTTCCCGCTGGTGGAAATGGCTTATTCCGTGTCTGCTTCTGATTGGTCAGTTTCTGCTGTTTTTCCTTCTGGCAGAAAACGGGGAACTGAAACTGCTTTACTGGCAGCCATCGGAAACCATGATTGCGTATGAAACCCTGACAGCACGAGTCGGCGGGCTTGCCGGTGTGACAGACAGGCTGGAGAGTATCAGCGGCATGTTGCTGATGTTGGTTATCCAGTATGGCTGGCAGTTGCTTGCACTGATGTTACTGGGTGCGCTGCTGATGAAAAACGGCTGGCTGAAAGGTGAGTACTCACTGGCTCATTACCGGCGGCTGGCAGGCGGGATACTGATCCCGACACTGTTATTACAGGCGGTTGTGGTGTGGCAGGTATATCTCAGCGGCTGGAGTGTGTTCTGGTTGGGCAGTATTGGTTATCCGCTGTCTGAGATTTTACAACCGGTGCAGACTGTCGGGCTGATTGCGCTGTTTTACGGCTTGCGCCCACAACTGAAGCCGGTTTCCGTTTATCTGCAACGGGTCGGGCGCACCGCACTCAGCAGTTATCTGCTGCAATCTGTCTGTGGGGTGATTATATTCAATTATCTCGGGTATTTTAATCAGTTTGACAGATTGACACTGCTGGCATTTGTACCTGTTATGTGGATGATTAATATTGTATTTTCCACGCTCTGGCTGCGTTATTTTTCTCAGGGACCGGTTGAGTGGTTGTGGCGGCAGGCAGCAAACCGGCTCGCCACCCGCTGAATAACCTTAATTTTCGGGTTGATGTACGGTGACGGGTTTCTCTTTTGTTG