Homologs in group_1236

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_06775 FBDBKF_06775 87.7 Morganella morganii S1 - MFS transporter
EHELCC_04195 EHELCC_04195 87.7 Morganella morganii S2 - MFS transporter
NLDBIP_04195 NLDBIP_04195 87.7 Morganella morganii S4 - MFS transporter
LHKJJB_10025 LHKJJB_10025 87.7 Morganella morganii S3 - MFS transporter
HKOGLL_08950 HKOGLL_08950 87.7 Morganella morganii S5 - MFS transporter
PMI_RS03145 PMI_RS03145 63.5 Proteus mirabilis HI4320 - YbfB/YjiJ family MFS transporter

Distribution of the homologs in the orthogroup group_1236

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1236

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P39381 4.2e-15 79 27 7 358 4 yjiJ Uncharacterized protein YjiJ Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS00920
Feature type CDS
Gene -
Product YbfB/YjiJ family MFS transporter
Location 195549 - 196694 (strand: 1)
Length 1146 (nucleotides) / 381 (amino acids)
In genomic island -

Contig

Accession NZ_VXKB01000001
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1236
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF06779 Uncharacterised MFS-type transporter YbfB

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2814 Carbohydrate transport and metabolism (G) G Predicted arabinose efflux permease AraJ, MFS family

Protein Sequence

MSRQITALHIAVSGFLALVVAMGIGRFAFTPQVPLMIDEHQLSLATASIVAACNYLGYFAGSFDAMRAKRGIELRLWTGLWGAVIITLLSAVISGAVLHGIARFFIGWASGWTLVLAAAWTNDALAKLSRPTLSVAVYGGTGIGILLCGLIAVGIQGLSLTASQGWWIYGGLALLFSLYVSRYLPRPGELHSSASPDSKPAMTPQIRRLLWTYALAGFGYILPATFLSQMAAERFPGSLFAQFVWPVFGIAAASGIVVAIATRRLFTPQIRLAMTLWGQAAGILAAEVVPGISGLVISAFLVGGGLMSAVQLAFQCGRELAPEHGRYMAGLLTTWYAAGQLGGPLVSSVSAYFTGRLEPALYVALAALVIGGIVIFRDRSS

Flanking regions ( +/- flanking 50bp)

ACGGGATCACAATCCATTAACATGCTGTATTCCTCATGCCGATAACGCCTGTGTCCCGACAAATAACTGCCCTTCATATTGCCGTCAGCGGCTTTCTCGCGCTGGTTGTGGCGATGGGGATTGGGCGTTTTGCTTTCACACCACAGGTGCCGCTGATGATTGATGAACATCAGCTCAGCCTGGCGACCGCCAGTATTGTGGCTGCATGTAACTATCTGGGCTATTTTGCCGGGTCTTTTGATGCGATGCGGGCAAAGCGCGGTATCGAACTGCGGTTATGGACAGGCTTATGGGGCGCGGTGATTATCACACTGCTGTCCGCTGTTATTTCCGGGGCAGTATTGCATGGTATTGCGCGGTTTTTTATCGGCTGGGCGAGTGGCTGGACACTGGTGCTGGCGGCTGCCTGGACAAATGATGCCCTGGCAAAACTGAGCCGCCCGACACTGAGTGTCGCCGTTTACGGCGGAACGGGCATCGGTATTTTGCTGTGCGGTCTGATTGCTGTCGGGATACAGGGGCTGTCGCTGACCGCTTCGCAGGGCTGGTGGATTTACGGCGGGCTGGCGCTGCTGTTCAGCCTGTATGTGAGTCGTTATTTACCGCGTCCGGGCGAATTGCACAGCAGTGCATCCCCGGACAGCAAACCGGCGATGACCCCGCAGATCCGCCGCTTGTTATGGACTTACGCGCTGGCGGGGTTTGGTTATATTCTGCCCGCCACCTTTCTGTCACAGATGGCGGCTGAGCGTTTTCCGGGCAGTTTGTTTGCGCAGTTTGTCTGGCCGGTTTTCGGTATTGCAGCGGCGTCCGGTATTGTGGTCGCTATTGCAACCCGCCGGTTATTCACGCCACAAATACGGCTGGCAATGACGCTCTGGGGACAGGCTGCGGGAATTTTAGCGGCAGAAGTGGTGCCGGGTATCAGCGGTCTGGTGATCAGTGCATTTTTGGTCGGCGGCGGGCTGATGTCTGCGGTACAACTGGCATTTCAGTGCGGACGCGAACTGGCGCCGGAGCACGGGCGCTATATGGCGGGGCTGCTCACCACCTGGTATGCCGCCGGGCAGCTCGGCGGGCCGCTGGTTTCGTCTGTTTCCGCGTACTTTACCGGCAGGCTGGAACCGGCACTGTATGTGGCGTTGGCGGCACTGGTTATTGGCGGAATAGTGATTTTCCGTGATCGCAGCAGTTAATGATATAAATAATATATTATAAATAAATCAGCAGGAGTATTATTCTCTCC