Homologs in group_1171

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_06740 FBDBKF_06740 92.3 Morganella morganii S1 ytcJ putative amidohydrolase YtcJ
EHELCC_04230 EHELCC_04230 92.3 Morganella morganii S2 ytcJ putative amidohydrolase YtcJ
NLDBIP_04230 NLDBIP_04230 92.3 Morganella morganii S4 ytcJ putative amidohydrolase YtcJ
LHKJJB_10060 LHKJJB_10060 92.3 Morganella morganii S3 ytcJ putative amidohydrolase YtcJ
HKOGLL_08915 HKOGLL_08915 92.3 Morganella morganii S5 ytcJ putative amidohydrolase YtcJ
PMI_RS03130 PMI_RS03130 56.6 Proteus mirabilis HI4320 - amidohydrolase

Distribution of the homologs in the orthogroup group_1171

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_1171

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
A0A1I9LN01 1.22e-33 138 25 15 575 2 LAF3 Protein LONG AFTER FAR-RED 3 Arabidopsis thaliana
Q68AP4 3.86e-32 134 25 17 582 1 nfdA N-substituted formamide deformylase Arthrobacter pascens
O34355 1.42e-31 132 25 14 565 3 ytcJ Putative amidohydrolase YtcJ Bacillus subtilis (strain 168)
Q06555 1.43e-25 113 23 14 422 3 aepA Exoenzymes regulatory protein AepA Pectobacterium carotovorum subsp. carotovorum
B2RLA8 1.62e-06 54 32 2 120 3 hutI Imidazolonepropionase Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / CIP 103683 / JCM 12257 / NCTC 11834 / 2561)
Q7MX82 1.66e-06 54 32 2 120 3 hutI Imidazolonepropionase Porphyromonas gingivalis (strain ATCC BAA-308 / W83)
Q12XX8 1.54e-05 51 31 1 67 3 ade Adenine deaminase Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M)
Q11E17 1.97e-05 50 35 3 96 3 hutI Imidazolonepropionase Chelativorans sp. (strain BNC1)
Q8A4B1 0.000116 48 30 3 126 3 hutI Imidazolonepropionase Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 / VPI-5482 / E50)
A8AZ63 0.000313 47 38 1 59 3 hutI Imidazolonepropionase Streptococcus gordonii (strain Challis / ATCC 35105 / BCRC 15272 / CH1 / DL1 / V288)
P39761 0.000388 47 36 2 71 1 adeC Adenine deaminase Bacillus subtilis (strain 168)
A3CL31 0.000518 46 40 0 50 3 hutI Imidazolonepropionase Streptococcus sanguinis (strain SK36)
Q64NP4 0.000635 46 32 3 126 3 hutI Imidazolonepropionase Bacteroides fragilis (strain YCH46)
Q5L8E4 0.000657 46 32 3 126 3 hutI Imidazolonepropionase Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / CCUG 4856 / JCM 11019 / LMG 10263 / NCTC 9343 / Onslow / VPI 2553 / EN-2)
Q73RN8 0.000725 45 33 3 93 3 hutI Imidazolonepropionase Treponema denticola (strain ATCC 35405 / DSM 14222 / CIP 103919 / JCM 8153 / KCTC 15104)
Q6ANH2 0.000757 46 32 1 67 3 ade1 Adenine deaminase 1 Desulfotalea psychrophila (strain LSv54 / DSM 12343)
Q5WD17 0.001 45 34 1 66 3 ade2 Adenine deaminase 2 Shouchella clausii (strain KSM-K16)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS00890
Feature type CDS
Gene -
Product amidohydrolase
Location 187109 - 188830 (strand: -1)
Length 1722 (nucleotides) / 573 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1171
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF07969 Amidohydrolase family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1574 General function prediction only (R) R Predicted amidohydrolase YtcJ

Protein Sequence

MKMTAADTIYHNGYIYTADAQNRVVEAVAIADGRILACGDNNEMAAFRGEHTQFTDLDGKMMMPGIIDGHMHPFWGGIQLFGCHLNYESLTINEILTRVQAHLDNDPRTGDNDWLKITAWLRQGMLPAGIDMFREDMDTLNTNRPVVLFSNDCHTLLANSRALELFGITKETPVPGDGKIGKHANGELNGILEDAPAMRAADSIPSIQADRAVDVARLVQKVLNEQGVTMVMDARVAEMQLDAFLALQQQGELTLRVQAAREITPDDAPDVASVPQAVNNAVAFAQRYHQAQWGPEPGIAVNNIKMFVDGVLQFPTMTASLLKPYRINNGTAAQPDWRETDNHGDLYFTADIIDALLERIAAAGYDPHLHTVGEGAVNMVLNGIEKMRAAHPGKDIRPGLAHNELVDAGDYARFAKLNTIACLSFQWAAPTAELAEFTRNMIGDTRFQQLEPIAKFIDAGAVVAFGSDWPIDDFNEWFDLKVAVTRRGHPVNGQPAQRLDTDRNLTVTEVLRAATIDSAYAQHREDILGSLEPGKLADMIVLDRNVFQIPADDIADVKVLRTIVGGKTVHLTN

Flanking regions ( +/- flanking 50bp)

AAACACATTTAATTATCAGCTGACTTTGCTGATAGGCATTGGAGATAATAATGAAAATGACTGCCGCTGATACTATTTATCACAACGGTTATATTTATACTGCAGATGCACAAAACCGTGTCGTTGAAGCTGTTGCGATTGCTGACGGACGTATTCTTGCCTGTGGTGATAACAATGAGATGGCAGCCTTTCGCGGTGAACATACTCAGTTTACCGATCTTGACGGCAAAATGATGATGCCGGGGATTATTGATGGTCACATGCATCCGTTCTGGGGCGGTATCCAACTGTTTGGCTGCCACCTTAATTATGAATCGCTGACTATTAATGAGATCCTGACCCGCGTTCAGGCACATCTGGATAATGACCCGCGCACCGGTGACAATGACTGGCTGAAAATCACCGCCTGGCTGCGTCAGGGTATGTTACCGGCGGGTATCGATATGTTCCGCGAAGATATGGATACGCTCAATACTAACCGCCCTGTCGTGCTCTTCTCCAATGACTGTCACACCCTGCTGGCAAACAGCCGCGCGCTGGAACTCTTTGGTATAACCAAAGAGACCCCGGTTCCGGGTGATGGCAAAATCGGTAAGCATGCCAATGGTGAACTCAACGGAATACTCGAAGATGCGCCTGCCATGCGTGCAGCCGACAGCATTCCGTCGATTCAGGCAGACCGCGCCGTTGATGTTGCCCGTCTGGTACAAAAAGTGCTGAATGAACAGGGTGTTACCATGGTGATGGATGCCCGTGTTGCTGAAATGCAGCTCGATGCCTTTCTGGCTCTGCAACAACAGGGTGAACTGACGCTGCGTGTTCAGGCCGCGCGTGAAATCACCCCCGATGATGCACCTGATGTCGCCTCTGTGCCGCAGGCAGTGAATAATGCTGTGGCATTTGCTCAGCGTTATCATCAGGCACAATGGGGACCGGAGCCCGGAATTGCAGTCAATAATATCAAAATGTTTGTCGACGGCGTGCTGCAATTCCCGACCATGACCGCATCCTTGCTGAAACCTTACCGGATCAATAACGGTACGGCAGCACAGCCTGACTGGCGTGAAACAGATAACCACGGTGACCTTTATTTCACCGCAGATATTATTGATGCCCTGCTCGAACGCATTGCAGCAGCAGGTTATGACCCGCATCTGCACACTGTCGGTGAAGGTGCTGTCAATATGGTGTTAAACGGCATCGAAAAAATGCGTGCCGCGCATCCGGGCAAAGATATCCGTCCGGGACTGGCACACAATGAACTGGTGGATGCCGGGGATTATGCGCGCTTTGCAAAGCTCAACACTATCGCCTGTCTCTCTTTCCAGTGGGCAGCACCGACCGCCGAACTGGCAGAATTCACCCGCAATATGATCGGTGATACGCGTTTTCAGCAACTGGAGCCGATTGCTAAATTTATTGATGCCGGTGCGGTTGTTGCTTTCGGTAGTGACTGGCCGATTGATGATTTTAATGAATGGTTTGACCTGAAAGTTGCCGTCACCCGCCGTGGTCACCCGGTAAACGGTCAGCCTGCACAGCGCCTGGATACTGATCGTAATTTAACGGTCACTGAAGTCTTACGCGCGGCAACGATTGATTCCGCTTATGCCCAGCACCGGGAAGATATCCTCGGCTCCCTGGAACCGGGTAAACTGGCGGATATGATTGTGTTGGATCGCAATGTTTTTCAGATACCGGCTGACGATATTGCCGATGTGAAAGTACTGCGGACTATTGTCGGTGGTAAAACCGTTCACCTGACAAATTAATTTACGTAACAGCACTTAACAGATAAAACCTCATGATAACCATGAGGTTT