Homologs in group_3803

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1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
PMI_RS09520 PMI_RS09520 29.5 Proteus mirabilis HI4320 - AEC family transporter

Distribution of the homologs in the orthogroup group_3803

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3803

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AA52 6.11e-40 145 35 5 310 3 yfdV Uncharacterized transporter YfdV Shigella flexneri
P0AA49 6.11e-40 145 35 5 310 3 yfdV Uncharacterized transporter YfdV Escherichia coli (strain K12)
P0AA50 6.11e-40 145 35 5 310 3 yfdV Uncharacterized transporter YfdV Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AA51 6.11e-40 145 35 5 310 3 yfdV Uncharacterized transporter YfdV Escherichia coli O157:H7
P45869 4.17e-34 130 31 5 304 3 ywkB Uncharacterized transporter YwkB Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS00750
Feature type CDS
Gene -
Product AEC family transporter
Location 157303 - 158250 (strand: -1)
Length 948 (nucleotides) / 315 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3803
Orthogroup size 2
N. genomes 2

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Genomic region

Domains

PF03547 Membrane transport protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0679 General function prediction only (R) R Predicted permease, AEC (auxin efflux carrier) family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K13936 malonate transporter and related proteins - -

Protein Sequence

MTETIIAALLPIVVTLLLGFFAGWHRDFDASQGATLNRMIMLYALPLTLFAGIMGISRDVLLSDWMMGVLLLAGMAGAYLITFFIAGVIFRRPPAIAALQALAISAPAAPFVGIPVLGHLFGEVSTIPIAFTGIILNLILSPVTLIMLARHSQPAVGNAPAAKPVTLGANLLSTIKEPMVWAPAAAFVLLLCDVRIPEAINSSLQLLGNATGGVSLFACGVILYSFKVKFNMTVALSVICKNILLPLAILLIGSAFAVDAKSLNMTVITLAIPTASICIILAVQYKTAQQEMASTLFFSTIMSVLTLGGFIYVLH

Flanking regions ( +/- flanking 50bp)

ATACCGGATTCTAATGAATTTCACTTAAGAAACACACCGGACTCTCTCTCATGACTGAAACCATTATTGCTGCCCTGCTGCCGATTGTCGTCACTCTGCTGCTTGGTTTTTTTGCCGGCTGGCACCGGGATTTTGACGCCTCACAAGGCGCGACACTCAACCGGATGATCATGTTGTATGCGCTCCCGCTGACACTGTTTGCCGGGATCATGGGGATTTCCCGCGATGTGCTGCTCAGCGACTGGATGATGGGCGTGCTGCTGCTTGCCGGGATGGCAGGCGCATATCTCATCACATTTTTTATAGCCGGGGTGATTTTCCGCCGTCCGCCGGCGATTGCCGCATTACAGGCGCTTGCTATCAGCGCACCGGCGGCTCCGTTTGTCGGGATCCCGGTTCTGGGGCATCTGTTCGGCGAAGTCAGCACCATTCCTATCGCATTTACCGGGATTATCCTGAACCTGATCCTGAGCCCGGTAACACTGATTATGCTTGCCCGTCACAGCCAGCCCGCTGTCGGTAATGCCCCTGCGGCAAAACCCGTTACGCTGGGTGCTAATCTGTTATCCACGATTAAAGAGCCGATGGTCTGGGCGCCTGCCGCCGCATTTGTGCTTTTGCTGTGTGATGTGCGCATCCCGGAGGCAATAAACAGCTCACTGCAACTGCTCGGTAACGCGACCGGCGGGGTTTCTCTGTTTGCGTGCGGGGTAATACTGTATTCATTTAAAGTAAAATTTAATATGACTGTTGCGCTGTCCGTTATCTGCAAAAATATCTTGCTGCCGCTGGCAATTCTGCTGATTGGCTCAGCTTTTGCGGTCGACGCGAAGTCACTTAATATGACGGTGATAACCCTGGCTATCCCGACCGCCTCTATCTGTATCATACTGGCCGTTCAGTACAAAACCGCACAGCAGGAGATGGCATCGACGTTATTTTTCAGTACGATTATGTCCGTCCTGACATTAGGCGGGTTTATCTACGTACTTCACTGATAATTTCCCTTTATCATGATCCTGATTTGACCTGAGCCTGGCTTTAGTTT