Homologs in group_1527

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_09860 FBDBKF_09860 85.8 Morganella morganii S1 nIF3 type 2 GTP cyclohydrolase I
EHELCC_04660 EHELCC_04660 85.8 Morganella morganii S2 nIF3 type 2 GTP cyclohydrolase I
NLDBIP_04660 NLDBIP_04660 85.8 Morganella morganii S4 nIF3 type 2 GTP cyclohydrolase I
LHKJJB_13970 LHKJJB_13970 85.8 Morganella morganii S3 nIF3 type 2 GTP cyclohydrolase I
HKOGLL_12565 HKOGLL_12565 85.8 Morganella morganii S5 nIF3 type 2 GTP cyclohydrolase I
PMI_RS02735 PMI_RS02735 72.5 Proteus mirabilis HI4320 - type 2 GTP cyclohydrolase I

Distribution of the homologs in the orthogroup group_1527

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1527

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q8ZD91 2.33e-125 358 65 0 247 3 YPO2697 GTP cyclohydrolase 1 type 2 homolog Yersinia pestis
P67270 4.86e-125 357 68 0 247 3 ybgI GTP cyclohydrolase 1 type 2 homolog Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P67271 4.86e-125 357 68 0 247 3 ybgI GTP cyclohydrolase 1 type 2 homolog Salmonella typhi
P0AFP6 2.95e-123 353 68 0 247 1 ybgI GTP cyclohydrolase 1 type 2 homolog Escherichia coli (strain K12)
P0AFP7 2.95e-123 353 68 0 247 3 ybgI GTP cyclohydrolase 1 type 2 homolog Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AFP8 2.95e-123 353 68 0 247 3 ybgI GTP cyclohydrolase 1 type 2 homolog Escherichia coli O157:H7
Q9CP72 6.57e-108 314 62 2 251 3 PM0183 GTP cyclohydrolase 1 type 2 homolog Pasteurella multocida (strain Pm70)
Q57354 3.5e-105 307 59 2 251 1 HI_0105 GTP cyclohydrolase 1 type 2 homolog Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q9KQA7 2.75e-103 303 58 2 251 3 VC_2093 GTP cyclohydrolase 1 type 2 homolog Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
P57387 1.25e-97 288 52 0 247 3 BU301 GTP cyclohydrolase 1 type 2 homolog Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
Q8K9N4 2.35e-91 272 48 0 247 3 BUsg_291 GTP cyclohydrolase 1 type 2 homolog Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Q89AJ8 1.28e-90 270 49 0 246 3 bbp_279 GTP cyclohydrolase 1 type 2 homolog Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
Q9HVX2 2.98e-85 257 55 2 233 3 PA4445 GTP cyclohydrolase 1 type 2 homolog Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q8XVA0 1.36e-76 234 48 2 248 3 RSc2931 GTP cyclohydrolase 1 type 2 homolog Ralstonia nicotianae (strain ATCC BAA-1114 / GMI1000)
Q9JXG9 2.56e-70 219 49 2 239 3 NMB2054 GTP cyclohydrolase 1 type 2 homolog Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)
Q9JWG6 1.78e-69 216 48 2 239 3 NMA0382 GTP cyclohydrolase 1 type 2 homolog Neisseria meningitidis serogroup A / serotype 4A (strain DSM 15465 / Z2491)
P45371 4.51e-68 213 47 2 246 3 Alvin_0067 GTP cyclohydrolase 1 type 2 homolog Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / NCIMB 10441 / D)
Q9PKS8 3.07e-43 149 35 3 250 3 TC_0384 GTP cyclohydrolase 1 type 2 homolog Chlamydia muridarum (strain MoPn / Nigg)
Q9Z946 4.11e-43 149 37 5 248 3 CPn_0137 GTP cyclohydrolase 1 type 2 homolog Chlamydia pneumoniae
Q9HP80 1.49e-41 145 37 5 253 3 VNG_1766C GTP cyclohydrolase 1 type 2 homolog Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1)
O28497 2.19e-41 144 34 5 250 3 AF_1777 GTP cyclohydrolase 1 type 2 homolog Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)
Q9UYT3 3.84e-41 144 34 3 250 3 PYRAB14240 GTP cyclohydrolase 1 type 2 homolog Pyrococcus abyssi (strain GE5 / Orsay)
O58361 5.91e-41 144 34 3 250 3 PH0627 GTP cyclohydrolase 1 type 2 homolog Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
O84110 1.04e-40 143 34 4 257 3 CT_108 GTP cyclohydrolase 1 type 2 homolog Chlamydia trachomatis serovar D (strain ATCC VR-885 / DSM 19411 / UW-3/Cx)
Q9RY41 5.06e-33 123 34 5 252 3 DR_0110 GTP cyclohydrolase 1 type 2 homolog Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / CCUG 27074 / LMG 4051 / NBRC 15346 / NCIMB 9279 / VKM B-1422 / R1)
O83942 5.87e-27 108 30 8 269 3 TP_0977 GTP cyclohydrolase 1 type 2 homolog Treponema pallidum (strain Nichols)
O51424 5.5e-22 94 28 8 247 3 BB_0468 GTP cyclohydrolase 1 type 2 homolog Borreliella burgdorferi (strain ATCC 35210 / DSM 4680 / CIP 102532 / B31)
Q8XIV9 1.55e-13 71 27 6 227 3 CPE2004 GTP cyclohydrolase 1 type 2 homolog Clostridium perfringens (strain 13 / Type A)
Q9L012 2.74e-11 65 31 7 205 3 SCO2301 GTP cyclohydrolase 1 type 2 homolog Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Q97JI0 1.64e-10 63 24 6 239 3 CA_C1303 GTP cyclohydrolase 1 type 2 homolog Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / IAM 19013 / LMG 5710 / NBRC 13948 / NRRL B-527 / VKM B-1787 / 2291 / W)
Q97PK0 1.14e-08 57 25 9 248 1 SP_1609 GTP cyclohydrolase 1 type 2 homolog Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)
Q5XCH0 9.8e-08 55 24 10 255 3 M6_Spy0758 GTP cyclohydrolase 1 type 2 homolog Streptococcus pyogenes serotype M6 (strain ATCC BAA-946 / MGAS10394)
Q8YS75 1.6e-07 54 25 5 208 3 alr3216 GTP cyclohydrolase 1 type 2 homolog Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)
P0DG85 2.55e-07 53 24 10 255 3 SPs1208 GTP cyclohydrolase 1 type 2 homolog Streptococcus pyogenes serotype M3 (strain SSI-1)
P67276 2.55e-07 53 24 10 255 3 spyM18_0988 GTP cyclohydrolase 1 type 2 homolog Streptococcus pyogenes serotype M18 (strain MGAS8232)
P0DG84 2.55e-07 53 24 10 255 3 SpyM3_0644 GTP cyclohydrolase 1 type 2 homolog Streptococcus pyogenes serotype M3 (strain ATCC BAA-595 / MGAS315)
P67274 2.55e-07 53 24 10 255 3 SPy_0931 GTP cyclohydrolase 1 type 2 homolog Streptococcus pyogenes serotype M1
O94404 4.4e-06 50 25 10 240 3 SPCC126.12 Protein NIF3 homolog Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P53081 7.35e-06 49 23 9 226 1 NIF3 NGG1-interacting factor 3 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q9KD39 3.03e-05 48 22 7 203 3 BH1380 GTP cyclohydrolase 1 type 2 homolog Halalkalibacterium halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
Q92BQ8 8.69e-05 46 29 5 141 3 lin1489 GTP cyclohydrolase 1 type 2 homolog Listeria innocua serovar 6a (strain ATCC BAA-680 / CLIP 11262)
P53434 9.52e-05 46 29 5 141 3 lmo1452 GTP cyclohydrolase 1 type 2 homolog Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS00485
Feature type CDS
Gene -
Product type 2 GTP cyclohydrolase I
Location 102355 - 103098 (strand: 1)
Length 744 (nucleotides) / 247 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1527
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01784 Duf34/NIF3 (NGG1p interacting factor 3)

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0327 Coenzyme transport and metabolism (H) H Putative GTP cyclohydrolase 1 type 2, NIF3 family

Protein Sequence

MNHLELEQIINEKLAVHEYQDYAPNGLQVEGRKTVKRIVTGVTACQALLDEAVLLNADTVLVHHGYFWKNEPVAIRGMKQRRIKTLLCNDINLYGYHLPLDGHPELGNNAQLADLMGVTVTGQLDQLVPCGKFSVPVTGEELAQRLQQGLGRDILHCGDNAPAQIKTLAWCTGGGQSFIQMAADAGVDGFVTGEVSEQTIHIAREMGLHFFAAGHHATERGGIRALGEWLKNEKGLDVIFVDIPNPA

Flanking regions ( +/- flanking 50bp)

TTTTCTTTGACAGGTATGGTAAACCTATTCGCCAGAATAGGATAAAAAGCATGAATCATCTTGAATTAGAACAGATTATCAATGAAAAACTTGCGGTACATGAGTATCAGGATTATGCCCCGAACGGGTTACAGGTTGAAGGGCGGAAAACAGTAAAACGCATTGTTACCGGTGTGACGGCATGCCAGGCATTGCTGGATGAAGCGGTTTTGCTGAATGCCGATACTGTTCTGGTGCATCACGGCTATTTCTGGAAAAATGAACCTGTTGCTATCCGCGGCATGAAGCAGCGCCGGATCAAAACACTGCTGTGTAATGATATCAATTTATACGGTTACCATCTGCCGCTGGACGGACACCCTGAGCTTGGTAATAACGCGCAACTGGCTGATTTGATGGGTGTAACGGTAACAGGACAGTTGGATCAATTAGTTCCCTGCGGTAAATTTTCCGTACCTGTGACCGGAGAAGAGCTGGCACAGCGCTTACAGCAGGGGTTAGGCCGTGACATTTTGCATTGCGGGGATAATGCCCCAGCACAGATAAAAACACTGGCATGGTGTACCGGCGGTGGTCAGAGTTTTATTCAGATGGCGGCCGATGCGGGTGTGGATGGTTTTGTGACCGGTGAAGTCTCAGAACAAACCATTCATATTGCCCGTGAAATGGGGCTGCATTTCTTTGCCGCAGGACATCATGCCACCGAACGCGGTGGTATCCGCGCACTGGGTGAGTGGCTGAAAAATGAAAAAGGGCTGGATGTGATATTTGTGGATATTCCGAATCCGGCGTAATTATTCAGTCAACAATATTCAGTCAGTAATATTAAGCCAGTAATATTAAG